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Name : LF82_290 (LF82_290) Accession : YP_006118321.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : Transposase Function : - COG functional category : - COG ID : - EC number : - Position : 1875723 - 1876100 bp Length : 378 bp Strand : - Note : corresponding to LF82_p290 in publication : Miquel et al., PLoS One; APEC_01; CFT073; ED1a; E2348, S88; SMS_3_5; UMN026; UTI89 DNA sequence : GTGTTCTACAGAGAGAAGCGTAGAGCAATAGGCTGTATTTTGAGAAAGCTGTGTGAGTGGAAAAGTGTACGGATTCTGGA AGCTGAATGCTGTGCAGATCATATCCATATGCTTGTGGAGATCCCGCCCAAAATGAGCGTATCCGGCTTTATGGGATATC TGAAAGGGAAAAGCAGTCTGATGCTTTACGAGCAGTTTGGTGATTTGAAATTTAAATACAGGAACAGGGAGTTCTGGTGC AGAGGGTATTACTTCGATACGGTGGGTAAGAACACGGCGAAGATACAGGATTACATAAAGCACCAGCTTGAAGAGGATAA AATGGGAGAGCAGTTATCGATTCCCTATCCGGGCAGCCCGTTTACGGGCCGTAAGTAA Protein sequence : MFYREKRRAIGCILRKLCEWKSVRILEAECCADHIHMLVEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWC RGYYFDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTGRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | NP_455584.1 | transposase for insertion sequence element is200 | Not tested | SPI-5 | Protein | 2e-52 | 94 |
| CPR_0382 | YP_697711.1 | IS1469, transposase | Not tested | Not named | Protein | 1e-31 | 62 |
| SP_1064 | NP_345538.1 | IS200 family transposase | Not tested | PPI-1 | Protein | 2e-33 | 59 |
| ef0123 | AAM75324.1 | EF0123 | Not tested | Not named | Protein | 4e-27 | 54 |
| EF0615 | NP_814372.1 | IS200 family transposase | Not tested | Not named | Protein | 6e-27 | 54 |
