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Name : LF82_228 (LF82_228) Accession : YP_002556337.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Unknown Product : Vgr-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 1488424 - 1490388 bp Length : 1965 bp Strand : + Note : corresponding to LF82_p228 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; ED1a; S88; UMN026; UTI89 DNA sequence : ATGTCCTTAAAAGGTCTTCGCTTTACGCTGGAGGTTGACGGCCAGGAGCCGGATACCTTTGCGGTGGTGAGCTTCCGGTT AATCCAGAGCCAGTCTTATCCGTTTGTGATGAGTGTGGATGTTGCCAGCGATTCTTTTATGCAGACGGCGGAGATGCTGC TGGAGAAGAACGCAACGCTGACTATCTGGCAGGGCGTCATCCCGCAGCGTTATGTCACAGGCGTGGTGGCAGGGTTTGGT ATGCAGGAGAACAATGGCTGGCAGATGCGTTACCACCTGTGTATTGAGCCGCCGTTATGGCGGTGCGGGCTGCGGCAGAA CTTCCGCATCTTCCAGCAGCAGGATATCCGGACGATATCGGCCACGTTACTGAACGAGAACGGCGTCACAGAGTGGACGC CGCTGTTTTATGAGGACCATCCGGCGCGGGAGTTCTGTGTGCAGTACGGGGAGTCGGACCTGGCGTTTCTGGCGCGGCTG TGGGCGGAGGAGGGGATTTTCTTCTTTGAGCGGTTTGCGGCGGACAGTCCGGAGCAGAAGCTGACGCTGTGCGACGATGT GGCGGGGCTGTCACAGGCGGGGGAGTTTCCGTTTAACCCGGACACATCGGCAGGAGCGGAAACGGAGTGTGTCAGTATGT TCCGTTATGAAGCCCATGTACGGCCGTCATCGGTGCAGAGCCAGGATTACACGTTTAAGGTGCCGGACTGGCGGGGGATG TATGAGCAGCAGGGTGAGAACCTGAACGGACAGCTTGAACAGTATGAGATATTTGATTATCCGGGAAGGTACAAGGATGA ACAGCACGGCAAGGATTTCACGCTGTACCAGATGGACAGCCTGCGCAGTGATGCGGAAAAGGCCACAGGGCAGAGTAATT CGCCGCGGCTGTGGCCGGGAACGCGGTTTACGCTGACGGGGCATCCGCAGAAGATGCTGAACCGTGAATGGCAGGTGATA CAGAGTATTCTGTCAGGGGACCAGCCGCAGGCGCTTCATGGCAGCCAGGGGAGAGGAACCACGCTGGGAAATCAGTTAGA GGTGATACCGGCGGACCGGACCTGGCGTCCACGGGTGCAGAGCAAACCGAAGGTGGACGGGCCACAGAGCGCCATTGTCA CCGGTCCCGCAGGAGAGGAAATCTTCTGCGACGAACATGGTCGGGTACGGGTGAAGTTTCACTGGGACCGTTATCACGGG ATGACGGAGGAGAGTTCGTGCTGGGTGCGTGTGTCGCAGGCGTGGGCGGGGCCGGGATTTGGTAATCTGGCGATACCGCG GGTGGGCCAGGAGGTGATTGTTGATTTTCTGAACGGGGACCCGGACCAGCCGCTGGTCATGGGCCGGACGTACCATGAGG ACAACCGCTCCCCGGGCGACCTGCCGGGAACGAAGACGCAGATGACCATCCGGTCAAAAACCTATAAAGGAAGCGGATTT AACGAGCTGCGGTTTGAAGACGCCACCAGTAATGAGCAGGTGTATATCCATGCGCAGAAGAACATGGATACGGAGGTGCT CAACGACCGGACAACGGATGTGAAACATGACCATACGGAGACCATCGGGAACGACCAGAAGATAACGGTGGGGTTGGGGC AGACGGTGAATGTGGGGAGCAAAAAGGAAGGTGGTCATGACCAGAAAGTGACAGTGGCGAATGACCAGACCATTACGGTA CAAAACGATCAGCGGCTGGATGTTACCCACGATCGTCACAAGGATGTAGGGAACGATCAAATCAGTAAGATAATAGGAAA AGATACCGAAGAAGTCGTGAAATCCCAGGATATTAAAGTTGGAGAAGATTACAGCCTGACAGTTACCAACAGCCTCACCA TTAAAGTCGGTGAATGCTTACTGAAAATGAATAAGGACGGTACTATCATTCTCAATGGTAAAAGTATCCAGATTGAAGGA AAAGATAAAATAAATATTTTCGGCGCAGATATTGATCTGGATTAA Protein sequence : MSLKGLRFTLEVDGQEPDTFAVVSFRLIQSQSYPFVMSVDVASDSFMQTAEMLLEKNATLTIWQGVIPQRYVTGVVAGFG MQENNGWQMRYHLCIEPPLWRCGLRQNFRIFQQQDIRTISATLLNENGVTEWTPLFYEDHPAREFCVQYGESDLAFLARL WAEEGIFFFERFAADSPEQKLTLCDDVAGLSQAGEFPFNPDTSAGAETECVSMFRYEAHVRPSSVQSQDYTFKVPDWRGM YEQQGENLNGQLEQYEIFDYPGRYKDEQHGKDFTLYQMDSLRSDAEKATGQSNSPRLWPGTRFTLTGHPQKMLNREWQVI QSILSGDQPQALHGSQGRGTTLGNQLEVIPADRTWRPRVQSKPKVDGPQSAIVTGPAGEEIFCDEHGRVRVKFHWDRYHG MTEESSCWVRVSQAWAGPGFGNLAIPRVGQEVIVDFLNGDPDQPLVMGRTYHEDNRSPGDLPGTKTQMTIRSKTYKGSGF NELRFEDATSNEQVYIHAQKNMDTEVLNDRTTDVKHDHTETIGNDQKITVGLGQTVNVGSKKEGGHDQKVTVANDQTITV QNDQRLDVTHDRHKDVGNDQISKIIGKDTEEVVKSQDIKVGEDYSLTVTNSLTIKVGECLLKMNKDGTIILNGKSIQIEG KDKINIFGADIDLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec15 | YP_851429.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 86 |
| aec15 | AAQ96709.1 | Aec15 | Not tested | AGI-1 | Protein | 0.0 | 86 |
| vgrG | AAN64196.1 | VgrG | Not tested | macrophage toxin pathogenicity island | Protein | 6e-131 | 46 |
