Name : LF82_185 (LF82_185) Accession : YP_002556081.1 Strain : Escherichia coli LF82 Genome accession: NC_011993 Putative virulence/resistance : Virulence Product : SitC protein Function : - COG functional category : - COG ID : - EC number : - Position : 1218513 - 1219370 bp Length : 858 bp Strand : - Note : corresponding to LF82_p185 in publication : Miquel et al., PLoS One; 536; APEC_01; CFT073; ED1a; IAI39; S88; SMS_3_5; UMN026; UTI89 DNA sequence : ATGAACGTGCTACTGGAACCCTTCAGCTATGAATATATGCTCAATGCGATGTGGGTCTCGGCGATGGTCGGCGGTCTCTG CGCTTTCCTGTCATGCTATCTGATGCTAAAAGGCTGGTCGCTGATTGGCGATGCGTTGTCGCACTCTATTGTCCCGGGTG TTGCGGGGGCATATATGCTGGGGCTTCCGTTTTCTCTGGGAGCCTTCTTTTCCGGCGGACTGGCTGCGGGCAGCATGCTG TTTCTTAACCAACGCACCCGCTTAAAAGAAGATGCCATCATCGGTCTGATCTTCTCGTCCTTTTTTGGCCTGGGGCTGTT TATGGTGTCATTGAACCCGACATCTGTGAACATTCAGACCATCGTCCTGGGCAATATTCTGGCAATCGATCCGGCGGATA TCCTGCAACTCACTATCATTGGCATTCTCTCGATCATCGTGCTTTTTTTCAAATGGAAAGATCTTATGGTGACCTTTTTC GACGAGAATCACGCCCGTGCTATTGGATTGCATCCGGGCAGATTAAAACTCCTCTTCTTCACCCTGCTGTCGGTTTCGAC CGTTGCGGCGCTGCAAACGGTTGGTGCCTTTCTGGTGATCTGTCTGGTGGTGACTCCCGGTGCAACAGCATGGTTGTTAA CCGATCGTTTTCCCCGCCTGCTCATGATTGCTGTAACTATTGGCAGTGTAACCAGTTTCCTCGGCGCGTGGGTCAGTTAC TTTCTGGACGGCGCGACAGGTGGAATCATCGTGGTGGCGCAGACACTGCTGTTTCTTTTAGCATTTGTCTTTGCGCCCAC CCATGGGCTTTTGGCAAATCGTCGGCGTGCGCATAAGGCGCTGGAGGATCGCTCATGA Protein sequence : MNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSML FLNQRTRLKEDAIIGLIFSSFFGLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFF DENHARAIGLHPGRLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLMIAVTIGSVTSFLGAWVSY FLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRRAHKALEDRS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-91 | 88 |
sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-91 | 88 |
sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-91 | 88 |
sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-91 | 88 |
sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-91 | 88 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
LF82_185 | YP_002556081.1 | SitC protein | BAC0351 | Protein | 1e-91 | 88 |
LF82_185 | YP_002556081.1 | SitC protein | BAC0441 | Protein | 4e-66 | 66 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
LF82_185 | YP_002556081.1 | SitC protein | VFG0527 | Protein | 1e-91 | 88 |