Gene Information

Name : LF82_144 (LF82_144)
Accession : YP_002556026.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Unknown
Product : C4-type zinc finger protein TraR-family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1174955 - 1175173 bp
Length : 219 bp
Strand : -
Note : corresponding to LF82_p144 in publication : Miquel et al., PLoS One; 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; IAI1; IAI39; EDL933; EC4115; 157_H7; S88; SE11; UMN026; UTI89

DNA sequence :
ATGGCAGACATCATTGATTCAGCATCAGAAATTGAAGAATTACAGCGCAACACAGCAATAAAAATGCGCCGCCTGAACCA
CCAGGCTATATCTGCCACTCATTGTTGTGAGTGTGGCGATCCGATAGATGAACGAAGACGCCTGGCCGTTCAGGGTTGTC
GGACTTGTGCAAGTTGCCAGGAGGAGATCGAACTTAAGAACAAACAATGGGGACTGTGA

Protein sequence :
MADIIDSASEIEELQRNTAIKMRRLNHQAISATHCCECGDPIDERRRLAVQGCRTCASCQEEIELKNKQWGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13500.1 hypothetical protein Not tested PAGI-6 Protein 0.013 45