Gene Information

Name : lolD (LF82_1214)
Accession : YP_002556004.1
Strain : Escherichia coli LF82
Genome accession: NC_011993
Putative virulence/resistance : Resistance
Product : Lipoprotein-releasing system ATP-binding protein lolD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1153291 - 1153992 bp
Length : 702 bp
Strand : +
Note : 536; 55989; APEC_01; ATC8739; CFT073; E24377A; ED1a; HS; IAI1; IAI39; E2348, EDL933; EC4115; 157_H7; S88; SE11; SMS_3_5; UMN026; UTI89; K12_DH10B; K12_MG1655; K12_W3110

DNA sequence : 
ATGAATAAGATCCTGTTGCAATGCGACAACCTGTGCAAACGCTATCAGGAAGGCAGTGTGCAAACCGATGTACTGCACAA
TGTCAGTTTCAGCGTGGGCGAAGGTGAAATGATGGCGATCGTCGGCAGCTCTGGTTCCGGTAAAAGCACCTTGCTGCACC
TGTTAGGCGGGCTGGATACGCCAACCTCCGGCGATGTGATCTTTAACGGTCAACCGATGAGCAAACTGTCGTCGGCGGCC
AAAGCGGAACTGCGCAACCAGAAGCTGGGATTTATTTATCAGTTTCACCACCTGCTGCCGGATTTTACCGCCCTGGAAAA
CGTGGCTATGCCGCTGTTGATTGGCAAGAAAAAGCCCGCTGAAATCAACAGCCGTGCGCTGGAGATGTTAAAAGCGGTGG
GGCTGGAGCATCGTGCGAATCACCGCCCATCTGAACTTTCTGGCGGCGAACGCCAGCGTGTGGCGATTGCCCGTGCGCTG
GTCAATAACCCGCGGCTGGTACTGGCGGATGAACCTACTGGTAACCTCGATGCACGTAACGCCGACAGCATCTTCCAGTT
GCTTGGGGAATTGAATCGCTTGCAGGGCACCGCCTTCCTGGTGGTTACTCACGACCTGCAACTGGCGAAACGTATGAGCC
GCCAACTGGAAATGCGTGATGGACGTCTGACGGCGGAACTGAGCCTGATGGGGGCGGAGTAA

Protein sequence : 
MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_002556004.1 Lipoprotein-releasing system ATP-binding protein lolD NC_008702.1.4606598. Protein 2e-37 49
lolD YP_002556004.1 Lipoprotein-releasing system ATP-binding protein lolD NC_012469.1.7686878. Protein 4e-41 45
lolD YP_002556004.1 Lipoprotein-releasing system ATP-binding protein lolD CP001581.1.gene798.p Protein 6e-37 41