Gene Information

Name : Dtpsy_0903 (Dtpsy_0903)
Accession : YP_002552381.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : tyrosine recombinase xerd
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 926334 - 927245 bp
Length : 912 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: ajs:Ajs_0988 tyrosine recombinase XerD

DNA sequence :
ATGGTTTTCGCCATGTTGCCCGACAGCCAGAACGCCATAGACCCCTTCATCGACGCCCTGTGGCTGGAGGACGGCCTGTC
GCGCAACACGCTGGCCGCCTACCGCCGGGACCTCACGCTGTATGCCCAATGGCTGGCGCAGCAGAACCCTCCGCTGGCGC
TGGATGCCACGGCCGAGCACCACCTGCAGGGCTACTTCGCTGCCCGCCACGCGCAAACGCGCGCCACGTCGGCCAACCGC
CGCCTCACCGTGCTGCGGCGCTACTTCCACTGGGCATTGCGCGAGCGGCGCATCGCAGCCGACCCCACAGTGCGCCTGCA
AGCCGCGCGCCAGCCGCTGCGCGTGCCCAAGACGCTGACGCAGGCGCAGGTGGAGGCCCTGTTGCATGCGCCGGACGATG
CCACGCCGCTGGGCCTGCGCGACCGCACCATGTTGGAGCTGATGTACGCGAGCGGCCTGCGCGTGAGCGAGCTGGTCACG
CTGAAAACCTTCCACCTGGGGCTGGCTGAAGGCGTGCTGCGCGTCATGGGCAAGGGCGGCAAGGAGCGGCTGGTGCCCTT
TGGCGAAGAGGCGCACCGCTGGCTGCAGCGCTACCTGGCCGAGGGGCGTGGCGCCATCCTGGGCGGGCAGCAAACGGATG
ACCTGTTCGTCACGCAGCGCGGCGCGGCCATGTCGCGCGTGATGTTCTGGGTCATCGTCAAGAAATGCGCGCAGGCTGCA
GGCATCACCGCGCCGCTGTCGCCCCACACGCTGCGCCATGCCTTTGCCACGCACCTGTTGAACCACGGTGCGGACCTGCG
CGTGGTGCAACTGCTGCTGGGCCACGCCGACATTTCCACCACCACCATCTACACCCACGTGGCGCGCGAGCGGCTGAAGG
CGCTGCATGCGCAGCACCATCCGCGCGGTTGA

Protein sequence :
MVFAMLPDSQNAIDPFIDALWLEDGLSRNTLAAYRRDLTLYAQWLAQQNPPLALDATAEHHLQGYFAARHAQTRATSANR
RLTVLRRYFHWALRERRIAADPTVRLQAARQPLRVPKTLTQAQVEALLHAPDDATPLGLRDRTMLELMYASGLRVSELVT
LKTFHLGLAEGVLRVMGKGGKERLVPFGEEAHRWLQRYLAEGRGAILGGQQTDDLFVTQRGAAMSRVMFWVIVKKCAQAA
GITAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTTIYTHVARERLKALHAQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 6e-55 54
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 6e-55 54