Gene Information

Name : Dtpsy_3349 (Dtpsy_3349)
Accession : YP_002554776.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3575493 - 3576167 bp
Length : 675 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ajs:Ajs_3999 two component transcriptional regulator

DNA sequence : 
ATGCGCATCCTCATCGCCGAAGACGACCAGGTGCTTGCCGACGGGCTGCTGCGCACGCTGCGCGGCTCGGGCGCCGTGGT
GGACCATGTGGCCAGCGGCACCGAGGTCGATACCGCGCTCCTGACCAACAACGAGTTCGACCTGCTGATCCTCGACCTGG
GCCTGCCCAAGATGCACGGCCTGGAGGTGCTCAAGCGCCTGCGTGGGCGCGGCTCGGCGCTGCCGGTGCTGATCCTCACG
GCGGCCGACAGCGTGGACGAGCGCGTGAAGGGCCTGGACCTGGGCGCCGACGACTACATGGCCAAACCGTTCGCGCTGTC
GGAGCTGGAGGCGCGCGTGCGTGCGCTCACGCGCCGCGGCATGGGCGGCACCAGCAGCGCCATCCGCCACGGGCCCCTGG
TGTACGACCAGGCGGGCCGCGTGGCCACCATCGACGGCAAGATGGTGGAGCTGTCCGCGCGCGAGCTGGGCCTGCTGGAG
GTGCTGCTGCAGCGCGCCGGCCGCCTGGTGAGCAAGGAGCAGCTGGTGGAGCGCCTGTGCGAGTGGGGCGAGGAGGTGAG
CAACAACGCCATCGAGGTCTACATCCACCGCCTGCGCAAGAAGATCGAGCGCGGGCCGATCCGCATCGCCACCGTGCGCG
GCCTGGGCTACTGCCTGGAAAAGATCCCCAGCTGA

Protein sequence : 
MRILIAEDDQVLADGLLRTLRGSGAVVDHVASGTEVDTALLTNNEFDLLILDLGLPKMHGLEVLKRLRGRGSALPVLILT
AADSVDERVKGLDLGADDYMAKPFALSELEARVRALTRRGMGGTSSAIRHGPLVYDQAGRVATIDGKMVELSARELGLLE
VLLQRAGRLVSKEQLVERLCEWGEEVSNNAIEVYIHRLRKKIERGPIRIATVRGLGYCLEKIPS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-38 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator BAC0083 Protein 7e-36 47
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator BAC0487 Protein 4e-37 47
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator BAC0197 Protein 8e-32 43
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator NC_002516.2.879194.p Protein 7e-33 43
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator BAC0638 Protein 1e-27 42
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator BAC0347 Protein 4e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator VFG0473 Protein 2e-38 43
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator VFG1390 Protein 4e-33 42
Dtpsy_3349 YP_002554776.1 winged helix family two component transcriptional regulator VFG1389 Protein 9e-27 41