Gene Information

Name : Dtpsy_3309 (Dtpsy_3309)
Accession : YP_002554738.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 3536868 - 3538904 bp
Length : 2037 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: ajs:Ajs_3959 transketolase

DNA sequence :
ATGGCCAACTCTCAACAAATGGCGAATGCGATCCGCGCACTCGCAATGGATGCCGTTCAACAAGCCAACTCCGGCCACCC
CGGCGCCCCCATGGGCATGGCCGACATGGCCGTGGCGTTGTGGGGCCGGCACCTGAAGCACAACCCCACCAACCCCCAGT
GGATGGACCGCGACCGTTTCGTGCTGTCCAACGGCCACGCGTCGATGCTGCTGTACTCGCTGCTGCACCTCACGGGCTAC
GACCTGCCCCTGCAGGAGCTGAAGAACTTCCGCCAGCTGCACAGCAAGACCCCCGGCCACCCCGAGCACGGCATCACCCC
CGGCGTGGAGACCACCACCGGCCCGCTGGGCCAGGGCGTGACCAACGCCGTGGGCTTTGCGCTGGCCGAGAAGCTGCTGG
CCGCCGAGTTCAACCGCGAAGGCCACGCCGTGGTGGACCACCACACCTACGTGTTCCTGGGCGACGGCTGCCTGATGGAA
GGCATCAGCCATGAGGCCGTGGCTCTCGCCGGCGCGTGGAAGCTCAACAAGCTCATCGCGCTGTACGACGACAACGGCAT
CAGCATCGACGGCCAGGTGGCGCCCTGGTTCATCGACAACACCCCGCAGCGCTTCATGGCCTGCGGCTGGAACGTGATCG
ACGCCGTGGACGGGCATGACGTGGAAGCTGTGGCCGCCGCCATCGGCCAAGCCAAGGCCAGCGCCGACAAGCCCACGCTG
ATCGTCTGCAAGACCGTCATCGGCAAGGGCAGCCCCAACCGCGCCAACACGGCCAAGGCCCATGGCGAGCCCCTGGGCGC
CGAGGAAATCAACCTCACGCGCGCTGCCCTGGGCTGGACGCACGAGCCCTTCGCGATCCCCGAGTCGGTGTACGCCGACT
GGGATGCCAAGGCGGCCGGCCAGGCCGCCGAAGCCGAGTGGACGCTGCGCTTTGCCGCCTACGAGGCCGCCTACCCCGAG
CTGGCATTCGAGCTGTCCCGCCGCATGGCTGGCGACCTGCCCAAGCACTTCGCCCAGGTGGCGGTGGACACCGTGGTGGC
CGCGCACACCAAGGCCGAGACCGTGGCCAGCCGCAAGGCCAGCCAGATCGCACTGGAAGCCTTCACCGCCGCACTGCCCG
AACTGCTGGGCGGCAGCGCCGACCTGACCGGCTCCAACCTCACCAACACCAAGAGCACGCCCGCGCTGCGCATCGAGCCC
AACGGCGCCGTGGCCAAGACCGAGGCCGGCCAGGTGGGCCGCCACATCAACTACGGCGTGCGCGAGTTCGGCATGGCGGC
CATCATGAACGGCCTGGCGCTGCACGGCGGTTTCATCCCCTACGGCGGCACCTTCCTCACATTCAGCGACTACAGCCGCA
ACGCCATCCGCATGGCCGCGCTGATGAAGCAGCGCGTGATCCACGTGTTCACCCACGACTCCATCGGCCTGGGCGAGGAC
GGCCCCACGCACCAGTCGATCGAGCACGCCGCCAGCCTGCGCCTGATCCCCGGCCTGGACGTGTGGCGCCCCGCCGACAC
GGCCGAGACCGCCGTGGCCTGGAGCGTGGCCCTGTCCAACCGCGACAAGCCCACCGCGCTGCTGCTGTCCCGCCAGAACC
TGCCCTACGCGCCCAAGAGCGACCTGGGCGACATCTCGCGCGGCGCCTACATTCTCTCCGAGCCCGCCGCCGTGGGTCTG
AAGAAGAAGGCCCAGGCCGTGATCATCGCCACCGGCTCCGAGGTGCAGCTGGCCCTGGCCGCGCAGCAACTGCTGGCCGC
CAAGAAGATCGCCGTGCGCGTGGTCTCCATGCCCAGCACCACCACCTTCGACCGCGAGGACACCAAGTACAAGCAACTGG
TGCTGCCCGCCGGCATCCCGCGCATCGCCGTCGAGATGGGCGTGTCCGACTTCTGGTGGAAGTACGGCTGCGCCGCGGTG
GTCGGCATCGACACCTATGGCGAGTCGGCCCCGGCCGGCGTGCTGTTCAAGCACTTCGGCTTCACGGCCGAGAACGTCGC
TGACACGGTGCTGGCCGCGCTGCAGCGCGCGCGCTGA

Protein sequence :
MANSQQMANAIRALAMDAVQQANSGHPGAPMGMADMAVALWGRHLKHNPTNPQWMDRDRFVLSNGHASMLLYSLLHLTGY
DLPLQELKNFRQLHSKTPGHPEHGITPGVETTTGPLGQGVTNAVGFALAEKLLAAEFNREGHAVVDHHTYVFLGDGCLME
GISHEAVALAGAWKLNKLIALYDDNGISIDGQVAPWFIDNTPQRFMACGWNVIDAVDGHDVEAVAAAIGQAKASADKPTL
IVCKTVIGKGSPNRANTAKAHGEPLGAEEINLTRAALGWTHEPFAIPESVYADWDAKAAGQAAEAEWTLRFAAYEAAYPE
LAFELSRRMAGDLPKHFAQVAVDTVVAAHTKAETVASRKASQIALEAFTAALPELLGGSADLTGSNLTNTKSTPALRIEP
NGAVAKTEAGQVGRHINYGVREFGMAAIMNGLALHGGFIPYGGTFLTFSDYSRNAIRMAALMKQRVIHVFTHDSIGLGED
GPTHQSIEHAASLRLIPGLDVWRPADTAETAVAWSVALSNRDKPTALLLSRQNLPYAPKSDLGDISRGAYILSEPAAVGL
KKKAQAVIIATGSEVQLALAAQQLLAAKKIAVRVVSMPSTTTFDREDTKYKQLVLPAGIPRIAVEMGVSDFWWKYGCAAV
VGIDTYGESAPAGVLFKHFGFTAENVADTVLAALQRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 2e-180 58
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 2e-174 57