Gene Information

Name : Dtpsy_3305 (Dtpsy_3305)
Accession : YP_002554734.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 3532048 - 3533484 bp
Length : 1437 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGCAGATCCGCCGCGCCACCAAGATCGTTGCCACCCTGGGCCCCGCCTCCAGCGACCCGCAACTGCTGGAGCAGATGAT
CGCGGCGGGCGTGAACGTGGTGCGCCTGAACTTCAGCCACGGCAAGGCGCAGGACCATGTGGAGCGCGCCGCCATGGTGC
GCGAGGCCGCCCAGCGCGCCGGGCGCGAGGTCGCCATCATGGCCGACCTGCAGGGGCCGAAGATTCGCGTGGGCAAGTTT
GCCGAAGGACGGGTGATGCTGGAGCCGGGCCTGCCTTTCGTGCTGGACGCGTCGCGCAGCGAGCCCGGCGACCTGCAGGG
CGTGGGCCTGGACTACAAGGAACTTCCCCGCGACGTGAAGCCCGGCGACGTGCTGCTGCTGAACGACGGCCTCATCGTGC
TGCAGGTGGATGCCGTGCGCGGCGAGGCCGTGTACACCACCGTGAAGATCGGCGGCGAGCTGTCCAACAACAAGGGCATC
AACAAGCAGGGGGGAGGCCTCACGGCGCCCGCCCTCACGGCCAAGGACATGGAGGACATCAAGACCGCCATGAGCTTCCA
GGCCGACTATGTGGCCGTGAGCTTCCCCAAGAACGCCACCGACATGGAGATGGCGCGCCAGCTGTGCAACGTGGCCGCGG
CCGAGTTCCGCCACAAGCCCGGCCTGATCGCGAAGATCGAGCGTGCAGAGGCCGTGCCGCTGCTGGAGGAGATCCTGCGC
GTGTCCGACGGCATCATGGTGGCGCGCGGCGACCTGGCCGTGGAGGTGGGCAACGCCGCGGTGCCCGCGCTGCAGAAAAA
GATGATCCGCATGGCGCGCGACATGGACAAAGTAGTGATCACCGCGACCCAGATGATGGAGAGCATGATCGCCAACCCCG
TGCCCACCCGCGCCGAAGTGAGCGACGTGGCCAACGCCGTGCTGGACGGCACCGACGCCGTGATGCTCAGCGCCGAGACG
GCTGCCGGCAAGTACCCGCTGGACACGGTGCGGGAGATGGCCACCATCTGCGCCGCCGCGGAAGCGGCCGAAGACCTGGA
GCGCGACTCCGACTTCATCGGCCAGACCCTGGGCCGCATCGACCAGTCCATCGCCATGGGCGCGCTGTTCACGGCGCACC
ACCTGGGTGCCAAGGCCATCGTGGCGATGACCGACAGCGGCTCCACGGCACTGTGGATGAGCCGCCACCGCATCCACATT
CCCATCTATGCATTGACGCCGAAGGTGGCCACGCAGCGGCGCATGGCGATGTTCCGCAACGTGCGCCCGTTGCTCATGGA
CACCAGCGCCGACCGCGACACTGCGCTGGACCAGGCCGAGAGCCACCTGAAGATGCGCAACATCGTGCAACAGGGCGACC
TGTACGTGATCACCTGCGGCGAGCCCATGGGCGCACCCGGCGGCACGAACATGCTCAAGATCTGCCGCGCACGATGA

Protein sequence :
MQIRRATKIVATLGPASSDPQLLEQMIAAGVNVVRLNFSHGKAQDHVERAAMVREAAQRAGREVAIMADLQGPKIRVGKF
AEGRVMLEPGLPFVLDASRSEPGDLQGVGLDYKELPRDVKPGDVLLLNDGLIVLQVDAVRGEAVYTTVKIGGELSNNKGI
NKQGGGLTAPALTAKDMEDIKTAMSFQADYVAVSFPKNATDMEMARQLCNVAAAEFRHKPGLIAKIERAEAVPLLEEILR
VSDGIMVARGDLAVEVGNAAVPALQKKMIRMARDMDKVVITATQMMESMIANPVPTRAEVSDVANAVLDGTDAVMLSAET
AAGKYPLDTVREMATICAAAEAAEDLERDSDFIGQTLGRIDQSIAMGALFTAHHLGAKAIVAMTDSGSTALWMSRHRIHI
PIYALTPKVATQRRMAMFRNVRPLLMDTSADRDTALDQAESHLKMRNIVQQGDLYVITCGEPMGAPGGTNMLKICRAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 4e-113 56
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 9e-61 41
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-61 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-61 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtpsy_3305 YP_002554734.1 pyruvate kinase VFG0479 Protein 2e-61 41