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Name : Dtpsy_3179 (Dtpsy_3179) Accession : YP_002554610.1 Strain : Acidovorax ebreus TPSY Genome accession: NC_011992 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3396012 - 3396887 bp Length : 876 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: ajs:Ajs_1844 integrase catalytic subunit DNA sequence : GTGAAGTACGCATTTATCGAGCGGCATGAACACGAGCACAGCGTGCGCCGCATGTGCAAGATCATGACGGTGCACCCCAG CGGCTACTACGCCTGGAAGGCCGATCCGGTGAGCCCACGCGCCCAGGACGATCAACGGGTGCTGGGCCTGCTCAAGCACG CGTGGTTGGAGAGCGGCGGCGTGTACGGCTACCGCAAGCTCACCCTGGACATGCGCGATCTAGGCGAGTCCTGCGGCAAG CACCGCGTGGCCCGATTGCTCAAACTCGAAGGACTGCGCTCGCAGACCGGCTACCGCCGTCGCCCTGGCATGCGTGGTGG CAAGCCCGCGGTCGTCGCGCCCAACCACCTGCAGCGCCAGTTCTCCGTGGCGCAGCCCAATCAATCCTGGGTGACCGACA TCACCTACATCCGCACCCATGAGGGCTGGCTGTACCTGGCCGTGGTGGTCGATCTGTTCTCGCGTCAGGTGGTCGGCTGG TCAATGGGTAGCCGCATCGATACCGGGCTGGCGCTCGATGCGCTGGTGATGGCCTTGTGGCGTCGTCGACCCGAGCAGCC AGTCACAGTGCATTCGGATCAAGGCAGTCAATTCACTGGGCATGACTGGCAGGACTTCCTACGCGACCACAAGCTGATCT GCAGCATGAGCCGTCGCGGCAACTGCCACGACAACGCCGTGGCCGAGAGCTTCTTCCAGTTGCTCAAGCGCGAACGCATC CGCCGCCAGATCTATCCGACCCGCGATGACGCGAGAGCCGATGTCTTCAACTACATCGAGATGTTCTACAACCCTAAGCG CCGCCATGGCACTGCCGGAGATACTTCGCCGGTAGAGTTCGAGAGACGCCATTCCCAACGGCTCAAAAGTGTCTAG Protein sequence : MKYAFIERHEHEHSVRRMCKIMTVHPSGYYAWKADPVSPRAQDDQRVLGLLKHAWLESGGVYGYRKLTLDMRDLGESCGK HRVARLLKLEGLRSQTGYRRRPGMRGGKPAVVAPNHLQRQFSVAQPNQSWVTDITYIRTHEGWLYLAVVVDLFSRQVVGW SMGSRIDTGLALDALVMALWRRRPEQPVTVHSDQGSQFTGHDWQDFLRDHKLICSMSRRGNCHDNAVAESFFQLLKRERI RRQIYPTRDDARADVFNYIEMFYNPKRRHGTAGDTSPVEFERRHSQRLKSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 3e-43 | 47 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-43 | 46 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 9e-49 | 44 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 3e-48 | 44 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 1e-48 | 44 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 8e-49 | 44 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 1e-30 | 42 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 2e-30 | 42 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 1e-30 | 42 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 2e-30 | 42 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 2e-31 | 42 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 2e-31 | 42 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 3e-45 | 41 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-45 | 41 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 3e-45 | 41 |
| ECO111_3779 | YP_003236114.1 | putative IS602 transposase OrfB | Not tested | LEE | Protein | 4e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dtpsy_3179 | YP_002554610.1 | integrase catalytic subunit | VFG1631 | Protein | 5e-49 | 44 |
| Dtpsy_3179 | YP_002554610.1 | integrase catalytic subunit | VFG0785 | Protein | 7e-31 | 42 |
