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Name : Dtpsy_3164 (Dtpsy_3164) Accession : YP_002554597.1 Strain : Acidovorax ebreus TPSY Genome accession: NC_011992 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 3381510 - 3382796 bp Length : 1287 bp Strand : + Note : PFAM: integrase family protein; KEGG: lch:Lcho_2977 integrase family protein DNA sequence : ATGGCTACCATGGCCCTCTCTGACACCACCATTCGCAGCGTCAAGCCCGGAGACCCGCGCAGACAGCTGACGGACGGCAA TGGACTTTACCTATTGCTCTACGTGAACGGGGGCAAGCATGGCTGGCGTTTTGACTACAAAGTCCAAGGCAAACGCAAGA CGATTTCGCTGGGGACCTACCCGGCAACATCGCTGTCGCTGGCACGCGCGAAAGCCAACGCAGCACGCGAACTGGTCGCA GCCGGGATTGACCCCAGCGCTGACCGAAAGTCGAAAAAGGCAGCGGAAAAAAAAGTGCACGAGGATGCAAAGCTCGTTGC CGCAGGCAAGCCTCTGAACGGTACCTTTGAGGCAGTCGCGCGGGAATGGTTTGAGGTGCGTTCGCCCGAATGGGCTGCCA AATACGCTGAAAAGGTTCTGCGCCGCCTTGAGGCCGACGTGTTTCCCCACATCGGAATACGGCCTGTCGGAGATGTAACC GCACCTGAACTTCTTGCCGTTCTGCGCCGTATCGAAGATCGAGGGGTCATCGAGACGGCGCATAGGGCACACGAAAGCTG CTCACAAATCTTCCGCTTCGCTGTAGGCGCGGGACTTGCGAAAGGGGATGTTGCACGCGACCTGAAGGGCCTGCTGCGTA AGCCAAGAACTAGGCACTTCCCTGCAATCCTGTGCCCCAAACGACTCGGCGAACTGCTGCGCGCGTGCGACGGCTACGTT GGTACGCACGTTGTACGCGCGGCCCTGAGTTTGGCTCCCATGCTGCTGCTGCGTCCAGGAGAGCTGCGGCATGCTCGATG GGATGAGATCAACCTGAACACAGCTACATGGACGATTCCAGGTGAGCGGATGAAACGTGAGCGGGAAGGTAAGCTCAACG GCATGCCACACATTGTCCCGCTCCCGCGGCAAGCGGTACAGGTACTTCGTGAGCTACACCCGATTACCGGCCGCGGCGAA CTCGTCTTCAGGGGAGAGCGCCATCATCACCGCCCGATGTCTGAAAACACGGTGAATGCAGCACTACGAGCGATGGGATT TGGAGCGGACGAGGTAACGGGACATGGATTCCGCGCGACCGCGCGGACGCTGCTGGACGAACGACTCGGCATTGCGTCAG AAATCATAGAAGCCCAGCTTGCTCATTCAGTTAAAGACAGCCTTGGGCGCGCGTACAACCGCACGGAGTACCTTGTTCAG CGCCGAAAGATGATGCAGCAATGGGCTAATTACCTGGAAGCCCTCCGCCGAGGAAATGCTACGAACGAAGTGCAAATGGC TGCCTAG Protein sequence : MATMALSDTTIRSVKPGDPRRQLTDGNGLYLLLYVNGGKHGWRFDYKVQGKRKTISLGTYPATSLSLARAKANAARELVA AGIDPSADRKSKKAAEKKVHEDAKLVAAGKPLNGTFEAVAREWFEVRSPEWAAKYAEKVLRRLEADVFPHIGIRPVGDVT APELLAVLRRIEDRGVIETAHRAHESCSQIFRFAVGAGLAKGDVARDLKGLLRKPRTRHFPAILCPKRLGELLRACDGYV GTHVVRAALSLAPMLLLRPGELRHARWDEINLNTATWTIPGERMKREREGKLNGMPHIVPLPRQAVQVLRELHPITGRGE LVFRGERHHHRPMSENTVNAALRAMGFGADEVTGHGFRATARTLLDERLGIASEIIEAQLAHSVKDSLGRAYNRTEYLVQ RRKMMQQWANYLEALRRGNATNEVQMAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ECO111_3718 | YP_003236059.1 | putative integrase | Not tested | LEE | Protein | 3e-63 | 41 |
| intP4 | CAE85151.1 | CP4 integrase protein | Not tested | PAI V 536 | Protein | 1e-64 | 41 |
| int | AAK16198.1 | Int | Not tested | PAI-I AL862 | Protein | 1e-64 | 41 |
| int | ADD91747.1 | P4 integrase | Not tested | PAI-I AL862 | Protein | 1e-64 | 41 |
| SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-64 | 41 |
| SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-64 | 41 |
