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Name : fliP (Dtpsy_3071) Accession : YP_002554504.1 Strain : Acidovorax ebreus TPSY Genome accession: NC_011992 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein flip Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : 3.1.1.3 Position : 3282599 - 3283354 bp Length : 756 bp Strand : - Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : ATGCATAAGGCCGTGCGCGGCATTGCGGCCGGTGCGGCTGGCCTGCTGCTGGCGGGCGCCGCCTGGGCGCAGCAGCAGCC CGCGGGCGCGCTGCCGCTGGTGATCGGCTCGGGGCCGGGCGGCACGAGCTACTCGGTGCCCATCCAGACGCTGCTGTTCT TCACGGCGCTGTCGTTCCTGCCGGCCGTGCTGCTCATGATGACGGGCTTCACGCGCATCGTGATCGTGCTGTCGCTGCTG CGCCAGGCCATCGGCACGCAGTCCGCGCCGCCCAACCAGGTCATCATCGGCCTGTCGCTGTTCCTCACGCTGTTCGTCAT GGGGCCCACGCTGGACAAGGTGTACCAGGAGGCCTACGTGCCCTACACCACCAACGCCATCACCTTCGAGCAGGCCATCC AGAGGGCAGAGGCGCCCATGCGCGGCTTCATGCTCAAGCAGACGCGGCAGTCCGACTTCGCGCTGTTCGCACGCCTGGCC AAGCTGGACGAGGGCGTGACGGCCGAGACTGCGCCGCTGCGCGTGCTGGTGCCGGCCTTCGTGACCAGCGAGCTGAAGTC GGCCTTCCAGATCGGCTTCATGATCTTCATTCCGTTCCTGATCATCGACATGGTGGTCTCCAGCGTGCTCATGTCGCTGG GCATGATGATGCTGTCGCCGGTGCTGGTGGCGCTGCCGTTCAAGCTCATGCTGTTCGTGCTGGCCGATGGCTGGAACCTG CTCATCGGCTCGCTGGCCGCGAGCTTCGCGACGTGA Protein sequence : MHKAVRGIAAGAAGLLLAGAAWAQQQPAGALPLVIGSGPGGTSYSVPIQTLLFFTALSFLPAVLLMMTGFTRIVIVLSLL RQAIGTQSAPPNQVIIGLSLFLTLFVMGPTLDKVYQEAYVPYTTNAITFEQAIQRAEAPMRGFMLKQTRQSDFALFARLA KLDEGVTAETAPLRVLVPAFVTSELKSAFQIGFMIFIPFLIIDMVVSSVLMSLGMMMLSPVLVALPFKLMLFVLADGWNL LIGSLAASFAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcR | AAP34349.1 | HrcR | Virulence | Hrp PAI | Protein | 2e-25 | 41 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 4e-24 | 41 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 4e-24 | 41 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-24 | 41 |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-24 | 41 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 8e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | YP_002554504.1 | flagellar biosynthesis protein flip | VFG2494 | Protein | 1e-62 | 67 |
| fliP | YP_002554504.1 | flagellar biosynthesis protein flip | VFG2338 | Protein | 4e-61 | 66 |
| fliP | YP_002554504.1 | flagellar biosynthesis protein flip | VFG1259 | Protein | 2e-57 | 62 |
| fliP | YP_002554504.1 | flagellar biosynthesis protein flip | VFG2016 | Protein | 7e-49 | 55 |
| fliP | YP_002554504.1 | flagellar biosynthesis protein flip | VFG0519 | Protein | 5e-25 | 41 |
