Gene Information

Name : murD (Dtpsy_2982)
Accession : YP_002554415.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoyl-l-alanyl-d-glutamate synthetase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0771
EC number : -
Position : 3175791 - 3177689 bp
Length : 1899 bp
Strand : -
Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation

DNA sequence :
ATGAACACTGGCCACCACGATCCCCTGCACCCCGACGCACTCGGCGCCGCAGCGACGACTGTGCCCCCGGCGCCCCCGTC
CACTCCCACGCCCGGGGAGCGGGACGACGCGTTGCCGCGGGATGCGGCGCACGACAGTCCGCCGCAGGATCTATCGCCCT
TGCCAGCGCCCGCGCAAGATGCAGCGGCGCGCTATGACTACACCGCACCCGCGGTGTCAGCCGCGGCCGCCGCGGCCGAG
TTCGTGGCGCGCATCTTTGCCGACGCGGCTCCGGCAGACGGTGGCGCTGGCACGTCTGCTGAAGACACCCCCGTTTCTCC
GGCTGCGGACCACGCCGTTGAGGAGCCTGCCGTCGCGTCCGAGGAGGCCCCGCAGGCGCCGCCCGCGCTTGCCGGCAAGC
AGGTGCTGGTGCTGGGTCTGGGCGCCTCGGGCCTGGCCATGGCGCGCTGGTGTGTGCGCTGTGGTGCGCAGGTCACCGTG
GCCGACACGCGCAGCAGTCCGCCGCAGCTGGCGGTGCTGCGCGCAGAACTGCCGCAGGTGGAGTTCATCGCCGGCGCCTT
CGATGAGACCCTGGTGCGGGGGCGCGCGCTGCACGCGGTATACCGTTCGCCAGGTCTGAGTCCGAATGAGATTGCTCCTG
TTGTTATAGCTGCTCGCGCCCGCCAGATAAGCGTGGAAGGCGAATTGGGTTTGTATGCGCAGGCGCTGCGCGAGCTGCGC
GCCGGTCAGGGCTATGCGCCCGCGGTGCTGGCCATCACCGGCACCAATGGCAAGACCACCGTGACCTCGCTCACGGGGCT
GCTGGTGGAGTGCGCGGACAAGCGCGTGGCGGTGGCCGGCAACATCGGCCCCACGCTGCTGGATACGCTGGCGCAGCACA
TCGACGCGGGCACGCTGCCCGAGGTGTGGGTGCTGGAGCTGTCGAGCTTTCAGCTCGATGGCGTGCAGGGCTTCGAGCCC
ACGGCCGCGGCCGTGCTCAACATCACGCAGGACCACCTGGACTGGCACGGCAGCCTGCAGGCCTACGCACAGGCCAAGGG
GCGCATCTTCGGCGAAACCGGCCTCATGGTGCTCAACCGCGAGGACGCGGAAGTCATGGCCCTGCTGCCGCCGCCAGTGC
GCGTGAAGCTGCAGAAGCCCCAGTTGCGCGCACACGTGACCTTCGGTGGCGACATGCCGCAGCGCCCGGGGGACTTCGGC
ATCGAGGTGGTCAGCGGCATGGCCTGGCTGGTGCGTGCACACGAAGCGGACGAAACGGCCAAGCGCGGCAAGGCGCAGGA
CGCCGAGCTGCACATCCAGCGCCTGATGCCCGCCGACGCGCTGCGCATCCGCGGGCGGCACAACGCCATCAATGCCCTGG
CTGCGCTGGCGCTGGCCCAGGCTGCGGGCTGCCCGCTCGCGCCCATGCTCTACGGCCTGCGCGAATACCGCGGTGAGCCG
CACCGCGTGGAGCCCGTGGGCATCGTGCGCGAGGTGGAGTACTTCGACGACAGCAAGGGCACCAACGTGGGCGCCACGGT
GGCTGCGCTGACCGGGCTGGGCGCCGACCGGCGCCTGGTGGTGATCCTGGGTGGCGACGGCAAGGGTCAGGACTTCTCGC
CGCTGGCCGCGCCCGTGGCGCGCTATGCGCGCGCGGTGGTGTTGATCGGGCGCGACGCGCCGCAGATCCGCGCCGCGCTG
CAGGGCTGCGGCGTGCCGCTGCAGGACGCCGCCACGCTGCCCGAGGCCGTGCAGTTGGCCACACAGCGCGCCCATGTGGG
CGACGCCGTGCTGCTGTCGCCCGCCTGCGCCAGCCTGGATATGTTCGACAACTACGCGCACCGCGCTCGCGTTTTCTGCG
AAGCCGTGCAGGCGCTGGCCGAAGACGCCGGCCAGACGCTGGAAGGAGGGACGGCATGA

Protein sequence :
MNTGHHDPLHPDALGAAATTVPPAPPSTPTPGERDDALPRDAAHDSPPQDLSPLPAPAQDAAARYDYTAPAVSAAAAAAE
FVARIFADAAPADGGAGTSAEDTPVSPAADHAVEEPAVASEEAPQAPPALAGKQVLVLGLGASGLAMARWCVRCGAQVTV
ADTRSSPPQLAVLRAELPQVEFIAGAFDETLVRGRALHAVYRSPGLSPNEIAPVVIAARARQISVEGELGLYAQALRELR
AGQGYAPAVLAITGTNGKTTVTSLTGLLVECADKRVAVAGNIGPTLLDTLAQHIDAGTLPEVWVLELSSFQLDGVQGFEP
TAAAVLNITQDHLDWHGSLQAYAQAKGRIFGETGLMVLNREDAEVMALLPPPVRVKLQKPQLRAHVTFGGDMPQRPGDFG
IEVVSGMAWLVRAHEADETAKRGKAQDAELHIQRLMPADALRIRGRHNAINALAALALAQAAGCPLAPMLYGLREYRGEP
HRVEPVGIVREVEYFDDSKGTNVGATVAALTGLGADRRLVVILGGDGKGQDFSPLAAPVARYARAVVLIGRDAPQIRAAL
QGCGVPLQDAATLPEAVQLATQRAHVGDAVLLSPACASLDMFDNYAHRARVFCEAVQALAEDAGQTLEGGTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 1e-46 42
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 1e-46 42