Gene Information

Name : Dtpsy_2542 (Dtpsy_2542)
Accession : YP_002553977.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein ribd
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 3.5.4.26
Position : 2706047 - 2707159 bp
Length : 1113 bp
Strand : +
Note : KEGG: ajs:Ajs_3190 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain pro

DNA sequence :
ATGACAGACGCCTCCCCCTTCATCAGCCAAGCGCTTGGGCTTGCCGCCCAGGCGCTTTTTCTTTCCAACCCCAATCCGCG
CGTGGGCTGCGTCATCACCAGCGACGCGGGTGCCGTGCTGGGCCAGGGCTTCACCCAGCAGGCCGGCGGCCCGCATGCCG
AGGTGATGGCGCTGCGCGACGCGGCGGCCCGTGGCAATGACGTGCGCGGGGCCACGGCCTATGTGACGCTGGAGCCCTGT
GCGCACCAAGGGCGCACCGGTCCCTGTTGCGATGCGCTGATCCAGGCCGGCATAGCGCGCGTGGTGGCGTCGGTGGCCGA
CCCGAACCCGCTGGTGGCGGGCCAGGGCTTTGCACGGCTGCGTGCGGCGGGGGTCGCCGTGGAGGCGGGGCCCGGCGCAG
CGGAAACACGCGAACTGAACATTGGCTTCTTCAGCCGCATGGTGCGCGGCATGCCCTGGGTGCGCATGAAGGCCGCGGCC
TCGCTGGATGGAGTGACGGCCTTGGGCAATGGCGCCAGCCAGTGGATCACTTCCCCCGCCGCGCGCGCGGATGGCCATGC
CTGGCGTGCGCGCGCCTGTGCGGTGCTGAGCGGCATAGGCACGGTGCTGGAGGACGACCCGCTGCTCAATGTGCGCGAGG
TGGCCACCCCGCGCCAACCCCACCTGGTGATCGTGGACAGCCGGCTGCAGACGCCGCCAGGCGCACGGCTGTTCGACGTG
GCGGACCGGCAGGTGCTGATCTACGCGGCTCAAGGCGAGGCCCAGGCGGCAGAGGCCTTGCGGGCGCGCGGCGCCACGGT
GGTCGTGCTGCCCAATGCGCGGGGCAAGGTGGACCTGCCCGCCATGCTGCGCGATCTGGCGCGGCGCAGCGTGAACGAGT
TGCATGTGGAGGCCGGCCACAAGCTCAACGGTTCCTTCCTGCGCGAAGGCCTGGTCGATGAAATGCTGCTGTACCAGGCC
CCCCTGTTGCTGGGCAGCGGGGCCCACGGGCTGGCAAGCTGGGGGCCGTTGCAAGCCTTGTCGGACGGGGTGCGCATGGA
GTTCCACAGCGTGCGGCAGATTGGGCCGGACCTGCGGGTGGTGGCCCGCGTGGCGGGGCGCGCGGACTTCTGA

Protein sequence :
MTDASPFISQALGLAAQALFLSNPNPRVGCVITSDAGAVLGQGFTQQAGGPHAEVMALRDAAARGNDVRGATAYVTLEPC
AHQGRTGPCCDALIQAGIARVVASVADPNPLVAGQGFARLRAAGVAVEAGPGAAETRELNIGFFSRMVRGMPWVRMKAAA
SLDGVTALGNGASQWITSPAARADGHAWRARACAVLSGIGTVLEDDPLLNVREVATPRQPHLVIVDSRLQTPPGARLFDV
ADRQVLIYAAQGEAQAAEALRARGATVVVLPNARGKVDLPAMLRDLARRSVNELHVEAGHKLNGSFLREGLVDEMLLYQA
PLLLGSGAHGLASWGPLQALSDGVRMEFHSVRQIGPDLRVVARVAGRADF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-43 42
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-43 42