Gene Information

Name : Dtpsy_2458 (Dtpsy_2458)
Accession : YP_002553894.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2612548 - 2613225 bp
Length : 678 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: ATPase AAA; KEGG: ajs:Ajs_3112 ABC transporter related

DNA sequence : 
ATGAGCCCCCAACCCACGACCCTGCTGCAGGTGCGCGGCCTTGCCAAGCGCTACGGCGGGCAGGCGGTGTTCGAGGGCGT
GGATCTGCAGGTGCAGCGCGGAGAGTTCGTCGCCATCGTTGGCGACTCGGGCGTGGGCAAGTCCACGCTGCTCAACTGCC
TGGCGGGGCTGGACCATTGGGATGCCGGTCAGGTGCTGCACGAGGGCGTGGATCTGGGGCAGTTGGACGACACGCAGCGC
GCCCTGTGGCGCCGCGCCCATGTGGGCTTCGTGTTCCAGGCCTTCCATGTGCTGCCGCATCTGGACGTGGCACAGAACGT
GGGCCTGCCGCTGATGCTGCTCAACCGCTCCGATGCGCGGCGCGTGCAGCAGATGCTGGCCGCCGTGGGCCTGGAAGGCC
TGGGCGAGCGGCTACCGCAGCAGCTCAGCGGGGGGCAGTTGCAGCGCGTGGCCATTGCCCGCGCGCTGGTGCACCGCCCC
GCCCTGCTGCTGGCCGACGAGCCCACGGGCAATCTGGACCCCACCACGGCGGCGCTGGTCATGGATCTGCTCATCGCCCA
GACCCGCGAGCACGGCGCCGCGCTGGTGCTGGTGACCCATTCGCAGGCCGCCGCGGCGCGGGCGGACCGGGTGCTGCGCC
TCACGGCGCAGGGTATCCGCCCGGCGCAAGCGATTTAG

Protein sequence : 
MSPQPTTLLQVRGLAKRYGGQAVFEGVDLQVQRGEFVAIVGDSGVGKSTLLNCLAGLDHWDAGQVLHEGVDLGQLDDTQR
ALWRRAHVGFVFQAFHVLPHLDVAQNVGLPLMLLNRSDARRVQQMLAAVGLEGLGERLPQQLSGGQLQRVAIARALVHRP
ALLLADEPTGNLDPTTAALVMDLLIAQTREHGAALVLVTHSQAAAARADRVLRLTAQGIRPAQAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-33 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-32 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtpsy_2458 YP_002553894.1 ABC transporter NC_008702.1.4606598. Protein 2e-29 50
Dtpsy_2458 YP_002553894.1 ABC transporter CP001581.1.gene798.p Protein 2e-38 43
Dtpsy_2458 YP_002553894.1 ABC transporter NC_012469.1.7686878. Protein 2e-33 43
Dtpsy_2458 YP_002553894.1 ABC transporter NC_012469.1.7685735. Protein 8e-30 43