Gene Information

Name : Dtpsy_0225 (Dtpsy_0225)
Accession : YP_002551709.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase sdr
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 244670 - 245443 bp
Length : 774 bp
Strand : +
Note : PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ajs:Ajs_0231 short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGAGCGATGCATTGACGCCCTTTCGCCTGGACGGCCGCGTGGTGCTGGTCACCGGCGCATCGAGTGGCCTGGGCCAGCA
TTTCGCGCGGCTGCTGGCTTCGGTGGGCGCTCGCATAGCCGTCGCCGCGCGCCGGGCCGACAAGCTGCAGGGCGTGGTGG
ATGACATCGCCGCCGCGGGCGGCGAGGCGCGGGCGTTCACGCTGGACGTGACGGACGCCGCCAGCGTGCGCGCGTGCCTG
GACGCCGTGGGCGCCTGGGGCGTGCCCGATGTGGTCATCAACAACGCGGGCGTCACGGTGACGCGCCCGCTGCTGGAGCA
GAGCGAAGAAGACTTCGACCAGGTGCTGGACACCAACCTCAAGGGCTGCTGGCTTGTCGCCACCGAGGCGGCGCGCCGCA
TGGTGGCCGCGGACAAGGGCGGCGCGATCGTCAATGTGGCTTCCATCCTGGGCGAGCGCGTGGCGGGCGGCGTGGCGCCG
TATGCAATCTCCAAGGCCGGCGTGGTCCAGGCCACCAAGGCCATGGCGCTGGAGCTGGCGCGCCACCGCATCCGCGTGAA
CGCGCTGCTGCCCGGCTACGTGGTGACCGACCTGAACCGCGACTTCCTCACCAGCGAGGCGGGCGACAAGCTGCGCAGCC
GCATCCCCAGCCGGCGCTTTGGCGAGCTGACGGACCTGGACGGGCCGCTGCTGTTGCTGGCGTCCGACGCCGGCGCCGCC
ATGTCGGGCGCCACGGTGGCGGTCGACGGCGCGCACCTGGTGAGTTCGCTATGA

Protein sequence :
MSDALTPFRLDGRVVLVTGASSGLGQHFARLLASVGARIAVAARRADKLQGVVDDIAAAGGEARAFTLDVTDAASVRACL
DAVGAWGVPDVVINNAGVTVTRPLLEQSEEDFDQVLDTNLKGCWLVATEAARRMVAADKGGAIVNVASILGERVAGGVAP
YAISKAGVVQATKAMALELARHRIRVNALLPGYVVTDLNRDFLTSEAGDKLRSRIPSRRFGELTDLDGPLLLLASDAGAA
MSGATVAVDGAHLVSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01499.1 2-deoxy-D-gluconate 3-dehydrogenase Not tested PAGI-1 Protein 2e-52 64