|
Name : Dtpsy_2168 (Dtpsy_2168) Accession : YP_002553613.1 Strain : Acidovorax ebreus TPSY Genome accession: NC_011992 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2310609 - 2311451 bp Length : 843 bp Strand : - Note : PFAM: Integrase catalytic region; KEGG: mlo:mlr6150 transposase DNA sequence : ATGGCGAAACACCGAGGAATCTGGCCGGTGGTGGTGATGTGCGACGCGCTCGGTGTCTCGCGAAGTGGCTTCTATGACTG GCTGGATCGACCGCCAAGCCAGCGCAGCCTGACCAACGAGGCGCTGGCCAAGCAGGTCAAGCAAAGCTTCGTGAACAGCG ACAGGACCTATGGCGCACGCCGGGTCTGGCGCGACGTGCTCGCCAGCGGCTTGAACTGTGGCCTGCACCTGGTCGAGAAG CTCATGCAGCAGCAGGCGCTGCGTGCCAGACCGAGACGGCGTGGTCTGCCCAAGGACGAAGGCCAGCGCAGCGAGATCGC CGACAACCTGCTGGAGCGTCAATTCAAGGCAGACGCTCCGAACCAGAAGTGGGTGGCCGACTTCACCTACATCTGGACCG CCGAGGGGTGGTTGTACGTGGCGGTGGTGTTGGACCTGTACTCGCGCAGGGCGGTGGGTTGGTCCATGCAGGCCAGCATG ACCTCGCAGTTGGTGGCCGATGCCTTGATGATGGCGGTCTGGCGGCGCGGCAAACCCGCAGCGCGAATGCACCACTCGGA CCAGGGCAGCCAATACACCAGCGGGCACTTCCAGCAGTTGCTCAAGGAACAAGGGATCACGTGCAGCATGAGCCGTGCTG GCGAGGTCTGGGACAACTCGGCGATGGAAAGCTTCTTCAGCTCAATGAAGACCGAACGCATCGCGCGCAAGGTCTACAGA ACCCGAGAGGAGGCGCGGGCTGATGTGTTCGACTACATCGAGCGGTTCTACAACCCGACTCGGCGGCACTCGACGATCGG CTACGTCAGCCCAGTACAGTTCGAACAAGCTCAAGGAGCTTAG Protein sequence : MAKHRGIWPVVVMCDALGVSRSGFYDWLDRPPSQRSLTNEALAKQVKQSFVNSDRTYGARRVWRDVLASGLNCGLHLVEK LMQQQALRARPRRRGLPKDEGQRSEIADNLLERQFKADAPNQKWVADFTYIWTAEGWLYVAVVLDLYSRRAVGWSMQASM TSQLVADALMMAVWRRGKPAARMHHSDQGSQYTSGHFQQLLKEQGITCSMSRAGEVWDNSAMESFFSSMKTERIARKVYR TREEARADVFDYIERFYNPTRRHSTIGYVSPVQFEQAQGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 2e-31 | 45 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 2e-31 | 45 |
| insF | CAC43414.1 | transposase of insertion element IS3 | Not tested | PAI III 536 | Protein | 7e-42 | 42 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 9e-39 | 42 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 8e-39 | 41 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 7e-38 | 41 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-36 | 41 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 2e-36 | 41 |
| orfB | AGK07090.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 2e-40 | 41 |
| tnpA1133 | ACK44540.1 | TnpA | Not tested | SGI1 | Protein | 2e-40 | 41 |
| orfB | AGK07032.1 | IS1133 transposase; OrfB | Not tested | SGI1 | Protein | 2e-40 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dtpsy_2168 | YP_002553613.1 | integrase catalytic subunit | VFG1484 | Protein | 1e-31 | 45 |
| Dtpsy_2168 | YP_002553613.1 | integrase catalytic subunit | VFG1631 | Protein | 4e-42 | 42 |
