Gene Information

Name : Dtpsy_2137 (Dtpsy_2137)
Accession : YP_002553590.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2283493 - 2284779 bp
Length : 1287 bp
Strand : -
Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mfa:Mfla_1489 arsenical pump membrane protein

DNA sequence :
ATGATTGCTGCCCTATTGATTTTTCTTGCCACTATCGCCTTGGTGATCTGGCAGCCGCGCGGGCTGGGCATTGGCTGGAG
TGCGACGCTTGGCGCTGTCGTGGCGTTACTGTCCGGTGTCGTTCACTTCGGTGACATTCCTGTCGTCTGGCAGATCGTCT
GGAACGCCACAGCCGCATTCATTGCCATCATCATCATTAGCCTGTTACTCGATGAGGCCGGGTTTTTCGAATGGGCAGCC
TTGCACGTCGCACGCTGGGGCGGAGGGAAAGGACGTCTGCTGTTTGCACTGATCATCCTGCTTGGTGCAGCCGTCGCCGC
GCTTTTTGCCAACGATGGCGCAGCACTGATTCTCACGCCAATCGTCATGGCCATGTTGTTGGCACTGGGGTTCAGTCCGG
CGGCAACGCTCGCCTTCGTCATGGCAGCCGGTTTCATCGCAGATGCCGCCAGCCTGCCGCTTGTCGTATCCAACCTGGTC
AACATCGTCTCCGCCGACTTTTTCAATATCGGGTTCAATGATTACGCTGCGGTGATGATTCCGGTGAATATTGTCGCCAT
CATTGCCTCTCTGGCCGTGCTGTCGATCTATTTCCGCCGCAGCATCCCCGCACGCTACGACGTGAATCAGTTGAAACAGC
CGAATGAGGCCATTCGCGATGCGGCTACGTTTCGTTTCGGCTGGGTGGTTCTGGCCCTGCTGCTGGTCGGATTCTTCGGC
CTTGAGCCGCTAGGCGTGCCGGTTAGCGCCGTGGCTGCCGCAGGCGCCCTGCTGTTGCTCGTAGTCGCTGCGCGCGGGCA
TGTCATCAGCACCCGCAAAGTGATCCGTGAAGCGCCTTGGCAAATTGTCGTTTTCTCGCTGGGAATGTATCTCGTGGTCT
ATGGGTTGCGTAACCAAGGCCTGACCGAGCATATCGCAAGGCTGCTGGATTACTTCGCACAAGGCGGTGTATGGGGGGCC
GCCTTTGGAACAGGCTTCCTCACAGCGCTGCTGTCCTCGGCCATGAACAACATGCCTACGGTACTGGTGGGCGCACTATC
CATTGATGCCACAAGCGCAACGGGCGTGGTGAAAGACACAATGATCTACGCCAATGTGATTGGTAGTGACCTGGGGCCGA
AGATCACCCCCATCGGCTCGCTGGCGACGCTGCTTTGGTTGCATGTGCTGGCGCGTAAGGGAATGACAATCACATGGGGG
TATTACTTCAAGGTGGGCGTTGTGCTGACCGTCCCCGTACTCGCGGCGACCCTGGCAGCGCTGGCACTGCGCCTGAGTCT
CACTTGA

Protein sequence :
MIAALLIFLATIALVIWQPRGLGIGWSATLGAVVALLSGVVHFGDIPVVWQIVWNATAAFIAIIIISLLLDEAGFFEWAA
LHVARWGGGKGRLLFALIILLGAAVAALFANDGAALILTPIVMAMLLALGFSPAATLAFVMAAGFIADAASLPLVVSNLV
NIVSADFFNIGFNDYAAVMIPVNIVAIIASLAVLSIYFRRSIPARYDVNQLKQPNEAIRDAATFRFGWVVLALLLVGFFG
LEPLGVPVSAVAAAGALLLLVVAARGHVISTRKVIREAPWQIVVFSLGMYLVVYGLRNQGLTEHIARLLDYFAQGGVWGA
AFGTGFLTALLSSAMNNMPTVLVGALSIDATSATGVVKDTMIYANVIGSDLGPKITPIGSLATLLWLHVLARKGMTITWG
YYFKVGVVLTVPVLAATLAALALRLSLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 8e-104 75
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-72 56
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-71 55
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-72 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtpsy_2137 YP_002553590.1 arsenical pump membrane protein BAC0576 Protein 3e-104 77
Dtpsy_2137 YP_002553590.1 arsenical pump membrane protein BAC0578 Protein 4e-103 76
Dtpsy_2137 YP_002553590.1 arsenical pump membrane protein BAC0031 Protein 1e-104 75
Dtpsy_2137 YP_002553590.1 arsenical pump membrane protein BAC0577 Protein 8e-102 75
Dtpsy_2137 YP_002553590.1 arsenical pump membrane protein BAC0575 Protein 7e-73 56
Dtpsy_2137 YP_002553590.1 arsenical pump membrane protein BAC0574 Protein 3e-72 56