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Name : Dtpsy_1997 (Dtpsy_1997) Accession : YP_002553453.1 Strain : Acidovorax ebreus TPSY Genome accession: NC_011992 Putative virulence/resistance : Unknown Product : resolvase rnase h domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 2133774 - 2136170 bp Length : 2397 bp Strand : - Note : PFAM: RNA binding S1 domain protein; Resolvase RNase H domain protein fold; SMART: RNA binding S1 domain protein; Resolvase RNase H domain protein fold; KEGG: ajs:Ajs_1707 RNA-binding S1 domain-containing protein DNA sequence : ATGCAGCAGATCGTTCGGCAGTTGGCCGCAGAAATCAAAGTCACCGAATCCCAGGTCCGCGCAGCGGTGGAGCTTCTCGA TGGCGGGGCCACCGTGCCCTTCATCGCGCGCTACCGCAAGGAGGTGACCGGCGGCCTGGACGATGTGCAGCTGCGCGAGC TCGAAGCGCGCCTGGCCTACCTGCGCGAGCTGGAAGACCGCCGCGTGGCCGTGCTGAAAAGCATCGACGAGCAGGGCAAG CTCACCGACGCATTGCGCGCTGCCATTGCTGCTGCTCCAACGAAGCAGGAGTTGGAAGACATCTACCTGCCGTTCAAGCA AAAGCGCCGCACCAAGGGCCAGATTGCCCGCGAGTTCGGCATTGAGCCGCTGGCCGACAAGCTGCTGGCCGACCCCACGC TGGATCCGCACGCCGAGGCCCAGGCTTTCTGCCAGCCCGCCACCACGCTCGATGACGGCAAGCCGGGGCCCGACTTCTCG ACCACCTTCGCCGTGCTCGACGGCGTGCGCGACATCCTGTCCGAGCGCTGGGCCGAGGACGCCGTGCTGGTGCAGTCGCT GCGCGAATGGCTGTGGGCCGAGGGGCTCTTGCGCAGTAAGAAGGTGGAGGGCAAGAACGAGAATGACCCCGAGGTCGCCA AGTTCCGCGACTACTTTGAGTACGACGAACCGATTGGCCGCGTGCCCTCGCACCGCGCGCTGGCGGTGTTCCGCGGTCGC GCGCTGGAGATTCTGGAAGCCAAGCTGGCGCTGCCTGAGCCGCAGGCGAATTCCACGTTCAAGCCCGAGCCGGGCCAGCC CAGCATTGCCGAGGGCAAGATCGCCCTGCACCTGGGCTGGAGCCACCAGGGCCGCAAGAGCGACGACCTGCTGCGCAAGT GCGTGGCCTGGACCTGGCGCGTGAAGCTCAGCCTGTCCACCGAGCGCGACCTGTTCTCGCGCCTGCGCGAAGAGGCCGAG AAGGTGGCCATCAAGGTGTTTGCCGACAACCTGCGCGACCTGCTGCTGGCCGCGCCCGCCGGCCCGCGCGCCGTGATGGG GCTGGACCCCGGCATCCGCACCGGCGTGAAGGTGGCCGTGGTGGACCGCACCGGCAAGCTGGTGGAGACCGCCACCGTCT ACCCGCACGAGCCGCGCCGCGATTGGGACGGCAGCCTGGCCACGCTGGGCCGCCTGTGCATGAAGCACGGCGTGCAGCTC ATCGCCATTGGCAACGGCACCGCCAGCCGCGAGACCGACAAGCTGGCGGCCGAGCTGATCAAATTAATGCAAAAACAGGC CGTAGACCAGGCAGATCAAGCGCTACCAGCTATTGAAAAGATAGTGGTGAGTGAGGCCGGCGCCTCGGTGTATTCGGCCA GCGAGTACGCCAGCCAGGAAATGCCCGACGTGGACGTGAGCCTGCGCGGCGCCGCCAGCATTGCGCGCCGCCTGCAGGAC CCGCTGGCCGAGCTGGTGAAGATCGAGCCCAAGAGCATTGGCGTGGGCCAGTACCAGCATGACGTGAACCAGAGCGAGCT GGCGCGCACGCTGGACGCCGTGGTCGAGGACTGCGTGAACTCCGTCGGCGTGGACCTGAACACCGCCAGCGCGCCGCTGC TGGCGCGCGTGTCGGGCCTGTCGGGCAGCGTGGCCAAGGCCGTGGTGCGCTGGCGCGAGCAGCACGGTGCCTTCAAGAAC CGCAAGCAGCTCATGGAGGTCAGCGGCCTGGGCGCCAAGACTTTCGAGCAGGCGGCGGGCTTCTTGCGCATCCGCGATGG CGACAACCCGCTGGACATGACCGGCGTGCACCCCGAGACCTACCCCGTGGTCGAGCAGATCATGGAAAAGACCGGCAAGC CGGTGGCCGAGCTCATGGGCCGCGCCGAGATGCTCAAGACGCTCAAGCCCGAGCTGTTCGCCAACGAGAAGTTCGGCGTG ATCACCGTGCGCGACATCCTGGGCGAACTGGAAAAGCCCGGCCGCGATCCGCGCCCCGACTTCAAGGTGGCGCGCTTCAA CGAGGGTGTGGAAGACATTGCCGACCTGCGCGAGGGCATGGTGCTGGAGGGCACGGTGAGCAACGTGGCCCAGTTCGGCG CCTTCGTGGACCTGGGCGTGCACCAGGACGGGCTGGTGCACGTGAGTCAGCTCAGCCACAAGTTCGTGAATGACGCGCGC GAGGTCGTCAAGACCGGCGACATCGTCAAAGTGAAGGTGCTGGAGGTGGACGCGGCGCGCAAGCGCATCAGCCTGAGCAT GAAGCTGGACGCCGCGCCGGCCCGGCGCGACGGCCCGCGCGACAACCGCTTCGAAGGCGCGGGCCGTGGCTACGCCCCAC CGCGCCGCGCGGCCGAGCCGGCACAGCCCTCGGCCATGGCCTCGGCCTTCGCCAAGCTGCAGCAGGGCAAGCGCTGA Protein sequence : MQQIVRQLAAEIKVTESQVRAAVELLDGGATVPFIARYRKEVTGGLDDVQLRELEARLAYLRELEDRRVAVLKSIDEQGK LTDALRAAIAAAPTKQELEDIYLPFKQKRRTKGQIAREFGIEPLADKLLADPTLDPHAEAQAFCQPATTLDDGKPGPDFS TTFAVLDGVRDILSERWAEDAVLVQSLREWLWAEGLLRSKKVEGKNENDPEVAKFRDYFEYDEPIGRVPSHRALAVFRGR ALEILEAKLALPEPQANSTFKPEPGQPSIAEGKIALHLGWSHQGRKSDDLLRKCVAWTWRVKLSLSTERDLFSRLREEAE KVAIKVFADNLRDLLLAAPAGPRAVMGLDPGIRTGVKVAVVDRTGKLVETATVYPHEPRRDWDGSLATLGRLCMKHGVQL IAIGNGTASRETDKLAAELIKLMQKQAVDQADQALPAIEKIVVSEAGASVYSASEYASQEMPDVDVSLRGAASIARRLQD PLAELVKIEPKSIGVGQYQHDVNQSELARTLDAVVEDCVNSVGVDLNTASAPLLARVSGLSGSVAKAVVRWREQHGAFKN RKQLMEVSGLGAKTFEQAAGFLRIRDGDNPLDMTGVHPETYPVVEQIMEKTGKPVAELMGRAEMLKTLKPELFANEKFGV ITVRDILGELEKPGRDPRPDFKVARFNEGVEDIADLREGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAR EVVKTGDIVKVKVLEVDAARKRISLSMKLDAAPARRDGPRDNRFEGAGRGYAPPRRAAEPAQPSAMASAFAKLQQGKR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 57 |
