Gene Information

Name : Dtpsy_1915 (Dtpsy_1915)
Accession : YP_002553372.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 2047956 - 2049593 bp
Length : 1638 bp
Strand : -
Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: ajs:Ajs_1813 ABC transporter related

DNA sequence :
ATGCGCGCTGCGCCCCCCCTGTCTCCCTCGTCCGCGCCGCTGCTGCAGGTGCGGGACCTGCGGGTGCGCTTCGGCGCCAA
GCAGGTGGTGCATGGGGTGAGCTTCGACATGGCCCCTGGCGAAAAGCTCGCGCTGGTGGGTGAATCCGGCTCGGGCAAAA
CAGTGACTGCGCTGGCGCTGCTGCGCCTGACGGGCGATGCGCAACTGGAGGGGAGCGCGCTGATGCACGGGCGCGACCTG
CTCCAACTGCCTGAGCGCGAACTGCGCGGCGTGCGCGGCGGCGACATCGCCATGGTGTTCCAGGAACCCATGACGGCGTT
GAACCCGCTGATGACGATTGGCGACCAGGTGGCCGAGGTCTTGGTGCTAAAACAGGCCCTGAGCAAGGCGCAGAGCGCGC
AAGCAGCTATCGAACTGCTAGCGAGTACCGGCATCCCCGAGCCGGCGCGGCGCGCGGGCAGTTTTCCGCACCAGCTTTCG
GGCGGGCAGCGCCAGCGCGCCATGATCGCCATGGCCCTGGCCAGTCGACCGAAGCTGTTGTTGGCCGACGAGCCCACCAC
CGCGCTGGACGTGACGCTGCGCGGCCAGATCCTGGACCTGCTGTCCGACCTGCAGCGCCAGACGGGCATGGCCGTGCTGC
TCATCACGCACGACCTGCTGCTGGTGCGCCGCTTTGCCGATCGCGTGGCCGTCATGGAGCAGGGCGCCGTGGTGGAGCAG
GGCACCGTCGCCCAGGTGTTCGACGCACCGCAGCATGCCTACACGCGCAAGCTGATCGGCAGTACGCCGCGGCGGGACGT
GGTGGAAGGCGGTGCCGACGGCGACGCCGTGCCCGCCGCGCAGGCAAGCGGCCTGCGCGTGGCCTACCCCGTGCCGGTGC
CGGGCATCCGCGGCTGGTTTGCCAAAGGTGAATTCGTGGCCGTGAAGGATGCGGGCTTTCGCATTGCGCGTGCGCGCACA
CTGGGGGTCGTGGGCGAATCGGGCTCGGGCAAGTCCACGCTGGCCCAGGCGCTGCTGGGCCTGCTGCCGTCGCGCGGTGA
CCTGCAGGTGGCCGGCCAGGCCTGGCAGCAGCCCGCCCACCGCAACACCGCGCACAACCAGCAGCTGCGCCGGCAGGTGC
AGGTGGTGTTCCAGGACCCGTTCTCATCCCTGTCGCCGCGCATGACCGTGGAGGAGATCGTGGGCGAGGGCCTGCGCGTG
CACATGCCTGCGCTGGACGTGGCCGAGCGCCGCACGCGCGTGGCCGCCATGCTGGCCGAGGTGGGCCTGACGGACGCGCA
ATTCCCGGGCCTGCTGGCGCGCTACCCGCATGAGTTCTCGGGCGGCCAGCGCCAGCGCCTGGCCATTGCGCGCGCGCTCA
TCGTCGAGCCGCAGGTGCTGGTGCTGGACGAGCCCACCAGCGCGCTGGACGTCACCATTCAGCAGCAGGTGCTGAGCCTG
CTGCAGCGCCTGCAGAAGGAGCGGGCGCTGTCGTACCTGCTCATCACGCACGACGTGGCGGTGGTGCGCGCCATGGCGCA
TGAGGTCATCGTCATGAAGGACGGCGAGGTGGTGGAAAGCGGCAGCGTGCACCAGGTGCTGGATGCGCCGCGCCACGCCT
ACACGCAACGGCTGGTGCAGGCCGCGCAGCCGGTCTGA

Protein sequence :
MRAAPPLSPSSAPLLQVRDLRVRFGAKQVVHGVSFDMAPGEKLALVGESGSGKTVTALALLRLTGDAQLEGSALMHGRDL
LQLPERELRGVRGGDIAMVFQEPMTALNPLMTIGDQVAEVLVLKQALSKAQSAQAAIELLASTGIPEPARRAGSFPHQLS
GGQRQRAMIAMALASRPKLLLADEPTTALDVTLRGQILDLLSDLQRQTGMAVLLITHDLLLVRRFADRVAVMEQGAVVEQ
GTVAQVFDAPQHAYTRKLIGSTPRRDVVEGGADGDAVPAAQASGLRVAYPVPVPGIRGWFAKGEFVAVKDAGFRIARART
LGVVGESGSGKSTLAQALLGLLPSRGDLQVAGQAWQQPAHRNTAHNQQLRRQVQVVFQDPFSSLSPRMTVEEIVGEGLRV
HMPALDVAERRTRVAAMLAEVGLTDAQFPGLLARYPHEFSGGQRQRLAIARALIVEPQVLVLDEPTSALDVTIQQQVLSL
LQRLQKERALSYLLITHDVAVVRAMAHEVIVMKDGEVVESGSVHQVLDAPRHAYTQRLVQAAQPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-73 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-73 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 9e-73 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 9e-73 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-77 41