Gene Information

Name : Dtpsy_1604 (Dtpsy_1604)
Accession : YP_002553063.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1697279 - 1698007 bp
Length : 729 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: ATPase AAA; KEGG: ajs:Ajs_2270 ABC transporter related

DNA sequence :
ATGTCCGAAACCTCCGCCGCCGCGGCCCCTGCCGCCTCCAACGACCGCATGCCGCCCGAATCCATCATCGCGGTGGAGCA
TGTGTTCAAGTCCGTCACGGACTCCACGGGTACGCTGGAGATTTTGCGGGATATCGATTTCCGCCTGGCGCCGCGGGAGA
CTGCGGCCATCGTGGGCGCGTCGGGCTCGGGCAAGAGCACGCTGCTGTCCATCATCGCCGGCCTGGACACGCCCACGCGC
GGCACGGTGCGCCTGGGCGGGCAGGACCTGTTCGCACTGGACGAGGACGACCGCGCCGCACTGCGCGCCCGGCAGGTGGG
CTTCGTGTTCCAGAGCTTTCAGCTCATGGGTAACCTCACGGCGCTGGAGAACGTGATGCTGCCGCTCGAGTTGGCGGGCA
TTCGCGATGCACGCCGCCGCGCGACCGACATGCTGGAGCGCGTCGGCCTGGGCCAGCGCTTGACGCACTATCCCAAGGTG
CTGTCGGGCGGCGAGCAGCAGCGCGTGGCGCTGGCACGCGCCTTCGTGGTGGAGCCCGCCGTGCTACTGGCCGACGAGCC
CACGGGCAGCCTGGACTTCGCCACGGGAGAGACCATCATGGAACTGATGCTGGCCCTCAACCGCGAGCAGGGCACCACGC
TGGTGCTGGTCACGCACGACCGCGGCATTGCCGCGCGCTGCGACCGGCGCATCACCATTGAGGCCGGACGGCTGGTCGAT
AACTCCTGA

Protein sequence :
MSETSAAAAPAASNDRMPPESIIAVEHVFKSVTDSTGTLEILRDIDFRLAPRETAAIVGASGSGKSTLLSIIAGLDTPTR
GTVRLGGQDLFALDEDDRAALRARQVGFVFQSFQLMGNLTALENVMLPLELAGIRDARRRATDMLERVGLGQRLTHYPKV
LSGGEQQRVALARAFVVEPAVLLADEPTGSLDFATGETIMELMLALNREQGTTLVLVTHDRGIAARCDRRITIEAGRLVD
NS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtpsy_1604 YP_002553063.1 ABC transporter NC_012469.1.7686878. Protein 9e-40 47
Dtpsy_1604 YP_002553063.1 ABC transporter NC_008702.1.4606598. Protein 7e-31 46
Dtpsy_1604 YP_002553063.1 ABC transporter CP001581.1.gene598.p Protein 8e-28 42