Gene Information

Name : Dtpsy_1423 (Dtpsy_1423)
Accession : YP_002552885.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Virulence
Product : molydopterin dinucleotide-binding region
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0243
EC number : -
Position : 1491425 - 1494619 bp
Length : 3195 bp
Strand : -
Note : PFAM: molydopterin dinucleotide-binding region; KEGG: ajs:Ajs_2424 molydopterin dinucleotide-binding region

DNA sequence :
ATGACTGACAAGAAACCGCATTCCTCTCCCGAGACCGAGGCCCACCCCGACGCCAACCGCCGCCGCCTGCTGCTGCGCGG
CGGCGCGGTGGCCGGTGGCCTGGCGGCCTTTGCCGCCGGCTACGGCGAAACCGTGGCCAAGGGCGCCAAGGGCCTGGTGA
CCGGCACGTCCGGCACCGCCACCAAGAGCGCCACGCGCGGCAATTCGCTCACGCCCGAGTTCCGCATCGACCCCGTGACC
GGCCAGCTCACCACCCAGCCGGGCCAGGTGGTCAGCCCCAGCAGCTGCCTGGGCTGCTGGACGCAGTGCGGCGTGCGTGT
GCGCGTGGACACCGAGCACAACAAGATCATCCGCATCGCCGGCAACCCCTACCACCCGCTGGCCACCACGCACCATGCGC
CCATGGAGACGCCCGTGCGCGAGGTGTACGCCCTGCTGGGTGGCGACAACGGCCTGGAAGGCCGCGCCACCAGCTGCGCG
CGCGGCTCCGCCATGCTGGAGCACCAGACTGCGGCCCACCGCGTGCTCACCCCGCTCAAGCGCGTGGGCCCGCGCGGCTC
CGGCCAGTGGAAAAGCATCTCGCTGGAACAGCTGGTCAAGGAAATCTGCGAGGGCGGCGACCTGTTCGGCGAAGGCCACG
TGGACGGACTGGCTGCCATCCGCGACGTGCAGACGCTGATCGACCCCGAGAACCCCGAGTACGGCCCCAAGGCCAACCAG
CTGCTGGTGACCGATGCCTCCAACGAAGGCCGCACCCCGCTCATCAACCGCTTTGCGCGCCAGTCCTTCGGCACGGTCAA
CGTGTCCAACCACGGCGCCTACTGCGGCCAGACCTACCGCGTGGGCACGGCGGCGGCCCTGGGCAACATCCCCGGCATGC
CGCACGGCAAGCCGGACTGGAAGAACTCGCGCTTCGGCCTGTTCCTGGGCACGGCGCCGGCGCAGTCGGGCAACCCGTTC
CAGCGCATGGGACGCGAGCTGGCCGAGGCCCGCTCGCGCGACGACAACACCTACCGCTACGTGGTGGTGTCGCCCGTGCT
GCCCATGTCGTCCAGCCACGCGGCGGGCGACAACAACCGCTGGCTGCCCATCAAGCCCGCCACCGACCTGGCGCTGGCCA
TGGCGCTGATCCGCTGGATCATCGACAACGAGCGCTACGACGCCAAGTACCTCACCCAGCCCGGCCCGGCTGCCATGGCC
GCCGCGGGCGAGGCCAGCTGGAGCAACGCCACCCACCTGCTCATCAACGACCCCAAGCACCCGCGCTACGGCCAGTTCCT
GCGCGGGGCCGACCTGGGCCTGCCCATGCCCGAGCCGGTGGACGAAAAGACCCCGGCCGAAGACGTCTATGTGGTGCAGG
TGGCAGATGGCAATGGCGGCTTCAAGCTGGTGCCCCACACCGTGGCCCAGCCGGCGGAGCTGGTGGTGGAGCGCGAATTC
ACGCCCCTGAAGGCCGCGGGCGCCACCGAAGAGCCCGCGCCCATCGCCGTGTGCACCGCCTTCGTCAAGCTGCGCGAGGA
AGCGCGCCGCAAGACGCTGCAGGAGTATTCCGACCTGTGCGGCGTACCGGTGAAAGACATCGAAGACCTGGCGCGCGAAT
TCACCAGCCACGGCAAGCAGGCCGTGGCCAACTCGCACGGCGGCACCATGAGCGGCGCAGGCTTCTACACCGCCTACGCC
ATCGCCATGCTGAACAACCTGATCGGCAACCTGAACGTCAAGGGCGGCTGGGTGCTGGACGCTGGCCCGTTCGGCCCCTT
TGGCCCCGGCCCGCGCTACAACTTCGCGCAGTTCGAGGGCGCGGTCAAAGCCACGGGCGTGGCGCTGTCGCGCACGCGCT
TTCCGTACGAGAAGACCAGCGAGTTCAAGCGCAAGAAGGAAGCCGGCCAGAACCCCTACCCCGCCAAGGCACCGTGGTAC
CCGGCGCCCGGGGGCCTCTCCAGCGAAATGCTGGCCGCCGGCCTGCTGGGCTACCCCTACCCGGTGAAGGCGTGGATCAA
CCACATGAGCAACCCGGTGTACGCCATCTGTGGCTTTGAGAACACGCTGGTCAGCGCCCTCAAGGACCCGAAGAAGCTGC
CGCTGTTCGTCTCGGTCGATCCGTTCATCAACGAGACCTCGGCCCTGGCCGACTACATCGTGCCCGACACCGTCACGTAC
GAAAGCTGGGGCATCGGCGCCCCCTGGGCCGACGTGATCGCCAAGAGCAGCACCGTGCGCTGGCCCACCGTGGAGCCCGC
CACCGCCAAGACGGCCGATGGCAAGCCGGTGAGCTTTGAGAGCTTCGTCTTCGCCGTGGCCAAGCAGCTGCAGCTGCCCG
GCTTTGGCAAGGGCGCGATGAGCACCAAGGACGGCGAGCCGCTCGACCTGGAAAGCGCCGAAGACTTCTACCTGCGCGGC
ATGTGCAACATCGCCTACCAGGCCGGCAAGCCCGTGCCTGAAGCCAGCGACGACGACATCGCCCTGACAGGCGTCACCCG
CTGGATGCCCGAAGTGGAAAAGCGCCTCAAGCCCGAGGAAGTGCGCCGCGTGGCCATGGTGATGAGCCGCGGCGGGCGCT
TCGACAAGATCGAAGACGCCTGGAAGGGCGAGCAGATCAAGGCCGCCTACAAGTTCCCCGTGCAGCTGTGGCACGAGGGC
CTGGCCAAGATGCGCCACTCCATGACCGGCGAGCGCTACGTGGGCTGCCCCACCTGGTTCCCCACCCGCTTTGCCGACGG
CAGCAGCATGCGCGAACGCTTCACCGAGCAGGACTGGCCGCTGACCATGAGCAGCTACAAGTCCAACCTGATGAGCAGCA
TGTCGATCGCCGCCAGCCGTCTGCGCCAGGTGCACCCGCACAACCCCATCAGCCTGAACAAGGACGATGCGGCCAAGCTG
GGTATCGCCAACGGCGACCGCATCGAGGTCAGCACCCCCGGCGCCAAGCTGCAGGGCGTGGCCCTGGTGCGCAGCGGCAT
CGCCCAGGGCGCCCTGGCCATCGAGTACGGCTACGGCCACAAGCAGCTGGGCGCCGCCGTTCACACCGTGGACGGCAAGC
CCATGGCCCACAACCCGCAGCACGGCAACGGCGTAAACCTGAACGCGCTGGGCTTTGCCGATCCCACCCGTCCCGCCAAG
GACAACGTGTGGATCGACTGGGTGTCGGGGGCCGTGGTGCGGCAGGGGTTGCCGGTGAAGGTGCGGAAGGTGTGA

Protein sequence :
MTDKKPHSSPETEAHPDANRRRLLLRGGAVAGGLAAFAAGYGETVAKGAKGLVTGTSGTATKSATRGNSLTPEFRIDPVT
GQLTTQPGQVVSPSSCLGCWTQCGVRVRVDTEHNKIIRIAGNPYHPLATTHHAPMETPVREVYALLGGDNGLEGRATSCA
RGSAMLEHQTAAHRVLTPLKRVGPRGSGQWKSISLEQLVKEICEGGDLFGEGHVDGLAAIRDVQTLIDPENPEYGPKANQ
LLVTDASNEGRTPLINRFARQSFGTVNVSNHGAYCGQTYRVGTAAALGNIPGMPHGKPDWKNSRFGLFLGTAPAQSGNPF
QRMGRELAEARSRDDNTYRYVVVSPVLPMSSSHAAGDNNRWLPIKPATDLALAMALIRWIIDNERYDAKYLTQPGPAAMA
AAGEASWSNATHLLINDPKHPRYGQFLRGADLGLPMPEPVDEKTPAEDVYVVQVADGNGGFKLVPHTVAQPAELVVEREF
TPLKAAGATEEPAPIAVCTAFVKLREEARRKTLQEYSDLCGVPVKDIEDLAREFTSHGKQAVANSHGGTMSGAGFYTAYA
IAMLNNLIGNLNVKGGWVLDAGPFGPFGPGPRYNFAQFEGAVKATGVALSRTRFPYEKTSEFKRKKEAGQNPYPAKAPWY
PAPGGLSSEMLAAGLLGYPYPVKAWINHMSNPVYAICGFENTLVSALKDPKKLPLFVSVDPFINETSALADYIVPDTVTY
ESWGIGAPWADVIAKSSTVRWPTVEPATAKTADGKPVSFESFVFAVAKQLQLPGFGKGAMSTKDGEPLDLESAEDFYLRG
MCNIAYQAGKPVPEASDDDIALTGVTRWMPEVEKRLKPEEVRRVAMVMSRGGRFDKIEDAWKGEQIKAAYKFPVQLWHEG
LAKMRHSMTGERYVGCPTWFPTRFADGSSMRERFTEQDWPLTMSSYKSNLMSSMSIAASRLRQVHPHNPISLNKDDAAKL
GIANGDRIEVSTPGAKLQGVALVRSGIAQGALAIEYGYGHKQLGAAVHTVDGKPMAHNPQHGNGVNLNALGFADPTRPAK
DNVWIDWVSGAVVRQGLPVKVRKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrA NP_460348.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 48
ttrA CAB37416.1 tetrathionate reductase subunit A (TtrA) Virulence SPI-2 Protein 0.0 48
ttrA YP_216391.1 tetrathionate reductase complex subunit A Virulence SPI-2 Protein 0.0 48
ttrA NP_456144.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 48
ttrA NP_805054.1 tetrathionate reductase subunit A Virulence SPI-2 Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dtpsy_1423 YP_002552885.1 molydopterin dinucleotide-binding region VFG0484 Protein 0.0 48