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Name : Dtpsy_1177 (Dtpsy_1177) Accession : YP_002552649.1 Strain : Acidovorax ebreus TPSY Genome accession: NC_011992 Putative virulence/resistance : Unknown Product : lytic transglycosylase subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1236781 - 1237371 bp Length : 591 bp Strand : - Note : PFAM: Lytic transglycosylase catalytic; KEGG: xcv:XCV2379 lytic transglycosylase precursor DNA sequence : ATGGCAGCGCCAGCCATAGCCGCCCCCCTGCGCACACTGGTGCTCGCCGCTGGCCTATGCGCCTGCGTCGCCCAAGCCCA GGAGGTTCCGCCACCGGCCTACCAGCTCGCCGCGCAGCGCGCAGGCATCCCCTCGACGGTGCTCTACGCCGTGGCCTTGC AGGAGAGTGGCATCCGCCGTAACGGACGCATCGTCCCGTGGCCGTGGTCCCTCAACGTCGCCGGCCAATCACGCCGCTAT GCGACCCGCGCCGATGCCTGCGCGGGTTTGCAGCAGGCGATGCGCTCCACGCCGCACACGCGCATCGACGCGGGCCTGGG CCAGATCAACCTCGGCTACCACCAGCAGCGCTACGCCAGCGCCTGCGACCTGCTCGACCCGTACCGGAATCTCGCCATCG CTGCCGAGATCCTGCGCGAGCAACACGCCCCCGGCGAGGACTGGTTGCTGGCGATGGGCCGCTACCACCGCCCCGCGGGT GGCGAGCCCGCCGCCCGCTACCGGCGCAGCGTGTCGCGCCACCTCGCCCGGGTGCAGGGCGCACGCCCAACCGCCGCGGT TCTCGCCGCACGCAAGGAGACATCCCCATGA Protein sequence : MAAPAIAAPLRTLVLAAGLCACVAQAQEVPPPAYQLAAQRAGIPSTVLYAVALQESGIRRNGRIVPWPWSLNVAGQSRRY ATRADACAGLQQAMRSTPHTRIDAGLGQINLGYHQQRYASACDLLDPYRNLAIAAEILREQHAPGEDWLLAMGRYHRPAG GEPAARYRRSVSRHLARVQGARPTAAVLAARKETSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C67 | AAN62161.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 5e-75 | 89 |
| ORF SG70 | AAN62292.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-58 | 82 |
| pph70 | CAI36111.1 | soluble lytic murein transglycosylase | Not tested | PPHGI-1 | Protein | 1e-42 | 58 |
| RL050 | AAP84175.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 1e-31 | 52 |
| unnamed | ABR13378.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-31 | 52 |
| EXA50 | ABD94659.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 7e-35 | 51 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 6e-25 | 44 |
| STY4559 | NP_458645.1 | hypothetical protein | Not tested | SPI-7 | Protein | 8e-23 | 42 |
| t4257 | NP_807855.1 | hypothetical protein | Not tested | SPI-7 | Protein | 8e-23 | 42 |
