Gene Information

Name : Dtpsy_1176 (Dtpsy_1176)
Accession : YP_002552648.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1236245 - 1236784 bp
Length : 540 bp
Strand : -
Note : KEGG: xcv:XCV2378 secreted protein

DNA sequence :
ATGACGACATCCCATCTGGCCTTGCGTGGCCTGCTCGTACTGCTGGCGGGTCTGCCGCTGGCCTCGCTTGCCGGCGAGCC
GCTGATCGTGGTCGAAGACCGCGGCGGCGCGTCGGCGCTGCCGTACTACGAAGCCCTGAACCTCCAGCCGCGCACCAACG
CACCGGCCCGGCCGCCGATCCCGACGCCCCAGGTTCCCGCCACGCCGGCGGACGAGGCCGCGATGCTGCCGGTGCGCAGC
GCCAAGCTCACCCCCGGCACCGTCCCGCGGCGTGTCATCGAGGCTCCGGGTCTGCGGCCTTTCGTTGTCGTCGGCGACGA
CGAGGCATCTCGGGCCTGGCTGCGCAGCCAGGCAGCCGCGCTGCGCGAGCGCGGCGCGGTCGGTCTGGTGGTCAACGTCG
AGACCGTGCAGGGCCTGGCGCGGCTGCGCACCCTGGTGCCCGGCGTACCCCTCGCGCCCATGTCCGGCGACGACCTGGCC
GAGCGCCTGGGCCTGCGGCACTACCCGGTGCTGATCACAGCCACCGGCATCGAGCAATGA

Protein sequence :
MTTSHLALRGLLVLLAGLPLASLAGEPLIVVEDRGGASALPYYEALNLQPRTNAPARPPIPTPQVPATPADEAAMLPVRS
AKLTPGTVPRRVIEAPGLRPFVVVGDDEASRAWLRSQAAALRERGAVGLVVNVETVQGLARLRTLVPGVPLAPMSGDDLA
ERLGLRHYPVLITATGIEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C66 AAN62160.1 hypothetical protein Not tested PAGI-2(C) Protein 9e-51 91
ORF SG69 AAN62291.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-40 67
pph71 CAI36112.1 hypothetical protein Not tested PPHGI-1 Protein 2e-28 51
EXA49 ABD94658.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-25 49
RL049 AAP84176.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-24 48
unnamed ABR13377.1 hypothetical protein Not tested PAGI-5 Protein 3e-25 48
PMI2590 YP_002152309.1 hypothetical protein Not tested Not named Protein 5e-20 44
Pmu_03200 YP_005176219.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-21 42