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Name : Dtpsy_1172 (Dtpsy_1172) Accession : YP_002552644.1 Strain : Acidovorax ebreus TPSY Genome accession: NC_011992 Putative virulence/resistance : Unknown Product : plasmid protein raqprd Function : - COG functional category : - COG ID : - EC number : - Position : 1233045 - 1233425 bp Length : 381 bp Strand : - Note : PFAM: plasmid conserved hypothetical protein RAQPRD; KEGG: har:HEAR2012 signal peptide DNA sequence : ATGTTGGCTCCGATCTGGCAGCGCGCCGCGCATCGCGGCGTGCCCATTTTTCTCGTGACGGCCCTGCTGCTGGGTCAGTC CCCGATGGCGTTGGCCGAGTCCCCCGCACAGCGCCAGGAGCTGGTCGCCGCGCTGCGCCAACTCGACGCGCTGGAGCGCA CCGTCGCCGACAGCGCCGCGCGTGCCCCCATCCAGCCGGGCGAGCGCTACCACTTCGATTACCCGCGGTTGCTGGCTGAC TTGGCGCGCGTGCGCGCCGGCATCCAGGCCCATCTCACACCGTCGCGTGCCCAGCCGCGCGACCCCTCCGAACTGGCCAG CGACTACCGCACCGAGCGGTCCGCTTCGCCATCGCCGACGACTACGGAAGCCAAGCCATGA Protein sequence : MLAPIWQRAAHRGVPIFLVTALLLGQSPMALAESPAQRQELVAALRQLDALERTVADSAARAPIQPGERYHFDYPRLLAD LARVRAGIQAHLTPSRAQPRDPSELASDYRTERSASPSPTTTEAKP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C55 | AAN62149.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 3e-46 | 89 |
| RL030 | AAP84157.1 | candidate type III effector Hop protein | Not tested | PAPI-1 | Protein | 1e-16 | 49 |
| EXA41 | ABD94650.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 9e-16 | 46 |
| unnamed | ABR13370.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 1e-16 | 45 |
