Gene Information

Name : Dtpsy_1166 (Dtpsy_1166)
Accession : YP_002552638.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1229005 - 1230423 bp
Length : 1419 bp
Strand : -
Note : KEGG: bpt:Bpet1079 hypothetical protein

DNA sequence :
ATGCGCAGTAACGGCTTGCTCAAGTGGCTGATGATCCCGGTCGCCTTGCTGGTGCTGTTCGTTGCCATCCGGCTGTTCTC
CGGTGGAAGCACGTCGGCACCGCCCGCCGCGGATGCTGGCTCCAAGCTCACGCCCGAGGAAATGAAGGCGTTGGGCATCG
AAGGCGATACCCCGCGCGATACCGTGGCAACGCTCGTCGCCCAGGTGAAACAGTTGCGCACCGAGCTTCAGACCGCGCTG
ACCGACAACAAGTCGCAGCGCGAGGAAAACCAGCGGCTGCGCCAGCGGGAGAACTCCATTGATCAGCGCATCAATTCGGC
CCTCGAATCCGAGCGCTCCAACCTGCGCCGCGACCAGGAACAGGCGGCCAGCGCGCGCCAGCAGACCGAGGGGCTGCTCG
CCGACCTGCAGCGGCGCCTGGACAGCATTGGCGGGCGCGGCGGCGGTCACGCTGATCTGCCGGTGGGCCTGGGGCTGCGC
GGCGGCGACGAGGCCGGCATGGAAGGCGGCATGCGCTGGGTCGAACCGGACGACGCGAAGAAGGCCGAGGGCCGCAATGG
CAGTCGTGGCGCAGGCAGCGGCATGAGCTTCCCGACGAGCTTCGGCCCGGCACAAAGCACACTGGAAACCACCGCGGAAA
CCGTGGCGAACGCCGGCGCAGGTGCGGCAGGCGTCAAGAGCGCCAAGCCGGTCTATACCGTGCCGACCAACTCGACACTG
ATGGGCTCCGTGGCGATGACGGCGCTGATTGGGCGCGTGCCGATCGACGGGACGGTGAACGATCCGTACCCCTTCAAGGT
GCTGGTCGGGCCGGACAATCTGACTGCCAACGGCATCGACATTCCCGACGTGGCCGGCGCGGTGTTCTCCGGAACCGCAT
CGGGCGACTGGACGCTCTCGTGCGTGCGCGGCCAGGTTCGCAGCATCACCTTCGTCTTCAACGACGGCACGATCCGCACG
ATTCCCGAAGACCGCGAAGGCAACCAGCAGAACAACCAGCAGCGCGACGGCCTGGGCTGGATCAGCGACCCGCACGGCAT
CCCGTGCGTCAGCGGCGAACGGCGCAGCAACGCCCAGCAGTACCTCGGGTCGCAAGCTCTGATCACCGCGGCCGGAGCCG
GCGTGGCCTCGCTCATCGAGAGCGACAGCGGCCGCATGTCCTACGTCGGCTCGGACGGCGCCATCGGCACCGTGGGCATC
AGCGGCAAGGAAGCAGTCGGCCAGATCCTCGCGGGCGGCGTCCGGGACATGTCGACCTGGGTCAACAAGCTCTACGGACA
GGCTTTCGCCGCCGTCTATGTGCAGCCAGGCGCCAAGGTCGCCGTCCACCTCGAAAAGCCGCTGGCCATCGATCACGACC
CCGAAGGCCGGCGCGTCGATCACCGTGCAGGAGAAAGCCATGCGCTCGAACTCGATTAA

Protein sequence :
MRSNGLLKWLMIPVALLVLFVAIRLFSGGSTSAPPAADAGSKLTPEEMKALGIEGDTPRDTVATLVAQVKQLRTELQTAL
TDNKSQREENQRLRQRENSIDQRINSALESERSNLRRDQEQAASARQQTEGLLADLQRRLDSIGGRGGGHADLPVGLGLR
GGDEAGMEGGMRWVEPDDAKKAEGRNGSRGAGSGMSFPTSFGPAQSTLETTAETVANAGAGAAGVKSAKPVYTVPTNSTL
MGSVAMTALIGRVPIDGTVNDPYPFKVLVGPDNLTANGIDIPDVAGAVFSGTASGDWTLSCVRGQVRSITFVFNDGTIRT
IPEDREGNQQNNQQRDGLGWISDPHGIPCVSGERRSNAQQYLGSQALITAAGAGVASLIESDSGRMSYVGSDGAIGTVGI
SGKEAVGQILAGGVRDMSTWVNKLYGQAFAAVYVQPGAKVAVHLEKPLAIDHDPEGRRVDHRAGESHALELD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C49 AAN62143.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 96
ORF SG59 AAN62281.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-143 72
pph82 CAI36123.1 hypothetical protein Not tested PPHGI-1 Protein 2e-102 48
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 5e-102 48
unnamed ABR13364.1 hypothetical protein Not tested PAGI-5 Protein 6e-102 48
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-97 48
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 3e-76 41
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 2e-78 41
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 6e-72 41