Gene Information

Name : Dtpsy_1165 (Dtpsy_1165)
Accession : YP_002552637.1
Strain : Acidovorax ebreus TPSY
Genome accession: NC_011992
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1228584 - 1229024 bp
Length : 441 bp
Strand : -
Note : KEGG: rme:Rmet_2352 secreted protein

DNA sequence :
ATGCGCTCGAACTCGATTAAGGGCCTCGCGCTGGCCGCGGCCGTCGCCGTGCTCAGCGGTTGCGCCACCAGCAAGGAAGA
ACTGCTGACCCATAGCGACCGCACCATGATGGACATCTGGCAGCAGGAAACGGGTGGCGGCGGCAGTGGCACCGGCCAGG
TCGCGCGCCGGCAGTTGCTCGACGCGCGCCAGAGCCTGCGCCGGCCGCTGACCGACGCCGATGTGCAGGCTGCGCCCGTC
GAGCAGATGCGCTACACGCGCACGGCGCGCAACGAGGTTTATCGCCAGTTCCAGCGCCTGCCCAACCCCGATCTCGTCAT
GTATGTGTACCCGCACCTGGCGGGCACGGACCCCGTGCCGGTTCCGGGCTACACGACGGTCTTCCCCCTGTACCAGCGCG
TGCAGTACGCCATGCCCGGTGAACGGCTGGAGGACTATTGA

Protein sequence :
MRSNSIKGLALAAAVAVLSGCATSKEELLTHSDRTMMDIWQQETGGGGSGTGQVARRQLLDARQSLRRPLTDADVQAAPV
EQMRYTRTARNEVYRQFQRLPNPDLVMYVYPHLAGTDPVPVPGYTTVFPLYQRVQYAMPGERLEDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-47 89
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 4e-41 74
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 3e-36 64
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-35 62
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 1e-31 61
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-35 61
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 2e-26 49
Pmu_03080 YP_005176207.1 conjugative transfer region lipoprotein Not tested ICEPmu1 Protein 3e-19 46
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 1e-25 44
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 1e-25 44
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 4e-20 43
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 1e-20 42
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 2e-21 42