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Name : Dtpsy_1076 (Dtpsy_1076) Accession : YP_002552553.1 Strain : Acidovorax ebreus TPSY Genome accession: NC_011992 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein Muts Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1121320 - 1123974 bp Length : 2655 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGACCGGGAAACCCGCGCCCACCCCGCGCCCCGACGAGGCCGACTTCTCGAACCACACGCCGATGATGGCGCAGTACCT GGCCCTGAAGGCGCAGCACCCCGACACGCTGCTGCTGTACCGCATGGGCGACTTCTACGAGCTTTTCTACGCCGATGCCG AGAAGGCCGCTCGCCTGCTGGACATCACACTCACCCAACGCGGCCAGTCGGCCGGCCAGCCGGTGACCATGGCGGGCGTG CCCTTCCATGCGCTGGAGAACTACCTGGGCCGCCTCATCAAGATGGGCGAGTCGGTCGCCATTGCCGAGCAGGTGGGCGA AGTGGGCGCCGCCAAGGGCCCCGTGGAGCGCAAGGTGGTGCGTGTGGTCACCCCCGGCACGCTCACCGATAGCGAACTGT TGTCCGACAAGAGCGAGTCCATGCTGCTGGCCGTGCACCAGGGCGCGCGTGCGCGCTGCGGCCTGGCGTGGCTCTCCGTC ACCCAGGGTGTGGTGCAGCTGGCCGAATGTGCACAGGCCGACGTGGGCACCTGGCTCGCACGCATTGCCCCCAGCGAGGT GATCTACAGCGCGGGCATCACCCAGCGCTTTGAAGAACAACTGACCCAGTTGCGCCAGGGCGGCGTGTTCACCTGCCCCA TGAGCCTGCGGCCCGACTGGCAGTTCGATGGTGCCCTGGGCGAGCGCAAGCTGCTGGAACACCTCGGCGCGGCCAGCCTG CAGGCCTGGAATGCCGAGGCCCTGCCCCACGCCCATGCCGCCGCCGCCGCGCTGCTGCAGTACGCCGAGCACACGCAAGG CCGCGCACTCACCCATGTGCACGGCGTGCGCGTACAGCAAAGCGACGAGCTGATCCACCTGCCCCTGGCCACGCGGCGCA ACCTGGAGCTGGTGAAGACCCTGCGCGGCGAGGACGCGCCCACGCTGTTCTCGCTGCTGGACACCTGCATGACCGGCATG GGCAGCCGCCTGCTCAAGACCTGGCTGCTGGAGCCGCGCCGCGACCGCAGCGACGCGCGCCAGCGCCTGGCGGCCACGGC CGCGCTGCGCGGCGCCGGCAGCGGCCAGGGCCCGTGGCAGCTCCTGCGCAGCGAACTGCGCGGCGTGAGCGACGTGGAGC GCATCACCGCGCGCATCGCGCTGCGCCAGGTGCGCCCGCGCGAGCTGGTGGCGCTGTGCAAGACGCTACAAAAAGCAGAG CTGCTCGCGCTCAACAGTCAAGCGCCAGAGCCGTTTTTGGCCCAAATCTTCAGCCACCTGCAGCCCCCCGTCGACTGCGC GGCGCTGCTGCGTGCCGCCATCCTGGAGGAACCCGCCGCCCTGGTGCGCGACGGCGGCGTGATCGCGCCGGGCTTCGATG CCGAGCTGGACGAGCTGCGCGGCATCCAGAACAACTGCGACGACTTCCTGCTCGATCTGGAGACGCGCGAGAAGGCACGC ACCGGCATCCCCAACCTGCGTGTGCAGTTCAACAAGGTGCATGGCTTCTACATCGAGGTCACCAGCAGCCACGCTGACAA GGTGCCCGAGGACTACCGCCGCCGCCAGACACTGAAGAACGCCGAGCGCTTCATCACGCCCGAGCTGAAGACCTTCGAGG ACAAGGCACTGTCGGCCCAGGAACGCGGCCTCGCACGCGAGAAGTGGCTGTACGAGCAGGTGCTGGACCAGCTGCAGCCG CATGTGCCCCAGCTCACGCGGCTGGCGCAGGCGCTGGCCACGCTGGACGTGCTGTGCACGCTGGCCGAGCGCTCGCTCAC GCTCAACTGGTGCGCACCGCAATTCGTCAACGAGCCCTGCATCGACATCGAGGCGGGCCGCCACCCCGTGGTGGAGGCCC GGCTGGCCGAAACATCAAGCGGCGCCTTCATCCCCAACCACACGCGCCTGCACGCCAACGCGCGCATGCAGATCATCACC GGCCCCAACATGGGCGGTAAGTCCACCTACATGCGGCAGGTCGCCCTGATCGTGCTGCTGGCGAGCATGGGCAGCCACGT GCCGGCCGCGGCCTGCCGGCTGGGTCCCATCGACGCGATCCACACCCGCATCGGCGCGGCCGACGATCTGGCCAATGCCC AGTCCACCTTCATGTTGGAGATGACCGAGGCGGCGCAGATCCTGCACGCCGCCACGCCGCACAGCCTGGTGCTGATGGAC GAGATCGGCCGCGGCACCAGCACCTTCGACGGGTTGGCGCTGGCCAGCGGCATCGCCACCCATCTGCATGACAAGACCCG CGCGTTCACGCTGTTCGCCACGCATTACTTCGAGCTGACCGAACTGGCGGCGCGCCACCCGCACGCGGTGAACGTGCACG TGGGCGCCACCGAGTCCGGCCACGATATCGTCTTCCTGCACGAGATCCAGCCTGGCCCCGCCAGCCGCAGCTACGGCATC CAGGTGGCGAAGCTGGCGGGGGTGCCCGCCGCCGTGCTGCACCACGCGCGCCACACGCTCGCCGCACTGGAAGAACGCGC GGGCGAGGATGAGCTGCAGGTGGACCTGTTCGCTCCGCCGCCCGCGCCCGAGGTGGCGACCGTGAGCCCCGTGGAGTCCG CCCTGGCGCAGATCCACCCGGACCAGCTGTCGCCCCGCGAGGCGCTGGACGCGCTCTACCAGCTCAAGCGGCTGAGCACG CCCGGTTTTGAATAA Protein sequence : MTGKPAPTPRPDEADFSNHTPMMAQYLALKAQHPDTLLLYRMGDFYELFYADAEKAARLLDITLTQRGQSAGQPVTMAGV PFHALENYLGRLIKMGESVAIAEQVGEVGAAKGPVERKVVRVVTPGTLTDSELLSDKSESMLLAVHQGARARCGLAWLSV TQGVVQLAECAQADVGTWLARIAPSEVIYSAGITQRFEEQLTQLRQGGVFTCPMSLRPDWQFDGALGERKLLEHLGAASL QAWNAEALPHAHAAAAALLQYAEHTQGRALTHVHGVRVQQSDELIHLPLATRRNLELVKTLRGEDAPTLFSLLDTCMTGM GSRLLKTWLLEPRRDRSDARQRLAATAALRGAGSGQGPWQLLRSELRGVSDVERITARIALRQVRPRELVALCKTLQKAE LLALNSQAPEPFLAQIFSHLQPPVDCAALLRAAILEEPAALVRDGGVIAPGFDAELDELRGIQNNCDDFLLDLETREKAR TGIPNLRVQFNKVHGFYIEVTSSHADKVPEDYRRRQTLKNAERFITPELKTFEDKALSAQERGLAREKWLYEQVLDQLQP HVPQLTRLAQALATLDVLCTLAERSLTLNWCAPQFVNEPCIDIEAGRHPVVEARLAETSSGAFIPNHTRLHANARMQIIT GPNMGGKSTYMRQVALIVLLASMGSHVPAAACRLGPIDAIHTRIGAADDLANAQSTFMLEMTEAAQILHAATPHSLVLMD EIGRGTSTFDGLALASGIATHLHDKTRAFTLFATHYFELTELAARHPHAVNVHVGATESGHDIVFLHEIQPGPASRSYGI QVAKLAGVPAAVLHHARHTLAALEERAGEDELQVDLFAPPPAPEVATVSPVESALAQIHPDQLSPREALDALYQLKRLST PGFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-158 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dtpsy_1076 | YP_002552553.1 | DNA mismatch repair protein Muts | VFG0562 | Protein | 1e-171 | 48 |
