Gene Information

Name : istB (Avi_9616)
Accession : YP_002551460.1
Strain :
Genome accession: NC_011991
Putative virulence/resistance : Unknown
Product : IS21 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 82904 - 83491 bp
Length : 588 bp
Strand : -
Note : -

DNA sequence : 
CTGGCGCAGCTTGGCTTCGTCGATCGACACGAGGCCGTGCATTTCCTCGGCCCACCTGGAACCGGCAAGAGTCATCTTGC
CACGGCGCTCGGCGTCGAAGCCGTCAAAGCTGGAAAGAGCGTCTACTTCACGAACCTTGCCGACCTCATCGGTTCGCTGG
CCCGTTCCGAACGGGAGGGTCGGCTTCAGGAGCGCATTCGCTTCTTTTGCAGGCCAAGCCTGCTCATCGTTGACGAGATC
GGATATTTGCCGGTCGTCCAGGGTGGCGGCAATCTGTTCTTCCAACTCGTGAACGCCCGATATGAACGAGGTGCGATGAT
CTTGACATCAAACCGCGGCTTCGCTGAATGGGGCGATGTCTTCGGGGACCCGGTTGTCGCCACCGCGCTTCTCGACAGAC
TGCTGCATCACGCCGTCGTCGTGCAAATCGAGGGATCGAGTTACCGATTGCGCCAGCATGCCGAACTGATGCCGGAGCAT
GTTCGCTCCAAAGCCCTCATTGCTCCGCCCGCATTCGCTCCACCTCAAAAGCCACGCGGGCGCGCGCCGAAAAATCCCCA
ATCCTCCCTGGCATCCACGTCGGCATAA

Protein sequence : 
MAQLGFVDRHEAVHFLGPPGTGKSHLATALGVEAVKAGKSVYFTNLADLIGSLARSEREGRLQERIRFFCRPSLLIVDEI
GYLPVVQGGGNLFFQLVNARYERGAMILTSNRGFAEWGDVFGDPVVATALLDRLLHHAVVVQIEGSSYRLRQHAELMPEH
VRSKALIAPPAFAPPQKPRGRAPKNPQSSLASTSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 3e-33 51
unnamed AAN85145.1 unknown Not tested Hrp PAI Protein 2e-23 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB YP_002551460.1 IS21 family transposase VFG1460 Protein 1e-33 51