Gene Information

Name : fliQ (Avi_0770)
Accession : YP_002548552.1
Strain :
Genome accession: NC_011989
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 658474 - 658740 bp
Length : 267 bp
Strand : +
Note : FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum

DNA sequence :
ATGAATGAAGCAGATGCCCTCGATATCATGCGCGCCGCTGTATGGACCGTGCTGATTGCCTCGGGGCCAGCCGTTCTGGC
CGCGATGATCGTCGGCGTCGTGGTCGCCTTGATCCAGGCATTGACCCAGATCCAGGAAATGACCCTGACATTCGTCCCAA
AAATCGTTGCGATCATGGTGACGATCGGTATTTCCGCTCCCTTTGTCGGGTCTCAAATTTCGATTTTTGCCAATCTGGTG
TTTTCCCGGGTCCAATCCGGCTTTTAA

Protein sequence :
MNEADALDIMRAAVWTVLIASGPAVLAAMIVGVVVALIQALTQIQEMTLTFVPKIVAIMVTIGISAPFVGSQISIFANLV
FSRVQSGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 3e-12 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_002548552.1 flagellar biosynthesis protein FliQ VFG0395 Protein 2e-12 42
fliQ YP_002548552.1 flagellar biosynthesis protein FliQ VFG0187 Protein 2e-07 42
fliQ YP_002548552.1 flagellar biosynthesis protein FliQ VFG2132 Protein 6e-05 42