Name : rph (Avi_0397) Accession : YP_002548279.1 Strain : Genome accession: NC_011989 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 341892 - 342611 bp Length : 720 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGACCTTCAGGCAGAAAAACCGACCAGATGCGCAAGATATCGTTCGAGCGCAATTTTTCCAAACACGCCGAAGGCTC TTGTCTCGTCAAGTTTGGCGATACCCATGTCCTGTGCACGGCAAGCCTTGAAGACCGCACCCCGCCCTGGCTGCGCAACA CCGGCAAGGGCTGGGTGACGGCGGAATACGGCATGTTGCCGCGCGCCACCGGCGAGCGGATAAAACGTGAAGCGTCCTCC GGCAAGCAGAGCGGCCGTACCCAGGAAATCCAGCGGCTGATCGGCCGTTCACTGCGCGCCGTGGTCGATCTGGAAGCCCT GGGCGAACGGCAGATCTCGCTTGATTGCGACGTGATCCAGGCCGATGGCGGCACCCGCACAGCCTCGATTACCGGCGCAT GGATTGCCTTGCACGATTGCCTGAAATGGATGGAATCGCGCAATATCATCAAGGTGGACCGGGTGCTGAAGGACCATGTC GCGGCGATTTCCTGCGGTATTTTCGCCGCCCAGCCAGTGATCGACCTGGACTATCTGGAGGACTCTGCCGCCGAAACCGA TGCCAATTTCGTCATGACCGGCACAGGCGGCATTGTCGAGATCCAGGGCACCGCCGAAGGCAAGCCGTTCAGCCAGGAAG AATTCCTGACCCTTCTCGGCCTTGCCCAGACAGGCATTGCCGAATTGGTGGACCTGCAAAAACAGGCGATTGCCGGATAA Protein sequence : MRPSGRKTDQMRKISFERNFSKHAEGSCLVKFGDTHVLCTASLEDRTPPWLRNTGKGWVTAEYGMLPRATGERIKREASS GKQSGRTQEIQRLIGRSLRAVVDLEALGERQISLDCDVIQADGGTRTASITGAWIALHDCLKWMESRNIIKVDRVLKDHV AAISCGIFAAQPVIDLDYLEDSAAETDANFVMTGTGGIVEIQGTAEGKPFSQEEFLTLLGLAQTGIAELVDLQKQAIAG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 8e-55 | 51 |