Gene Information

Name : hemC (Avi_4145)
Accession : YP_002551012.1
Strain :
Genome accession: NC_011989
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3493225 - 3494154 bp
Length : 930 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGCAAACGAAACCTTTCCGCATCGGCACACGCGGCAGCCCTTTAGCACTGGCCCAGGCCCATGAAACCCGCGAGCGTCT
GGCGACGGCCCACGGCCTTTCGCCTGATATGTTCGAGATCGTCGTCCTCTCGACCACCGGCGACCGCATTACCGACCGGT
CTTTGGCGGAAATCGGCGGCAAGGGCCTGTTCACCCTGGAGCTGGAACAGCAATTGCTGTCCGGCGGGCTGGATTTCGCC
GTGCATTCCTCCAAGGACATGCCAACCGCCCTTCCCGACGGGTTGGAGATTTCCGCCTATCTGCCACGGGAAGACATGCG
CGATGCCTTTATTGGCCGCACGGCACCGAAACTGCTGGAGCTTGCCGAGGGCGCGGTCATCGGCTCGGCCTCGCTCCGGC
GTCAAGCGCTGATTCGCAGGCTTCGGCCTGACCTCCAGGTCATTACCTATCGCGGCGCGGTGGAGACCCGGCTTCGCAAG
CTGGCCGCAGGCGAGGTCGATGCCACGCTGCTGGCCGTGGCCGGTCTGAAGCGGCTGGACAAGGAAACCGTGATTACCCA
ATATCTAGACCTCGAAAGCTTTCCGCCGGCACCGGCCCAAGGGGCGATCTGCATTGAGGCACGGGTCGATGACCGGCGCA
TCCAGGATCTTCTGGCTCCGATCAATCATCGCCCGACTTTTGACGCGGTTTCCTGTGAGCGTGCCTTTCTGGCCGCGCTC
GACGGTTCCTGCCGCACGCCGATTGCCGGCTATGCGATATCGGATGGCGAAATGATCCGTCTAACCGGGACGATCCTGAC
GCCGGACGGGCAGGTCTCGCATTCGGTCGAGGCCGAGGGCCGCTGTGCCGATGGCCTTGCGCTCGGCTGGTCGGCGGGCG
AAAAGGTAAGAGACAAGGCCGGACCCGGCTTTTTCGAGGGATGGACCTGA

Protein sequence :
MQTKPFRIGTRGSPLALAQAHETRERLATAHGLSPDMFEIVVLSTTGDRITDRSLAEIGGKGLFTLELEQQLLSGGLDFA
VHSSKDMPTALPDGLEISAYLPREDMRDAFIGRTAPKLLELAEGAVIGSASLRRQALIRRLRPDLQVITYRGAVETRLRK
LAAGEVDATLLAVAGLKRLDKETVITQYLDLESFPPAPAQGAICIEARVDDRRIQDLLAPINHRPTFDAVSCERAFLAAL
DGSCRTPIAGYAISDGEMIRLTGTILTPDGQVSHSVEAEGRCADGLALGWSAGEKVRDKAGPGFFEGWT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 4e-41 48
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 4e-41 48