Gene Information

Name : xylA (Avi_3832)
Accession : YP_002550771.1
Strain :
Genome accession: NC_011989
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 3183055 - 3184362 bp
Length : 1308 bp
Strand : -
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGAGCACAGGCTTTTTCGGCGACATCACCAAGATCAAATATGAAGGCCCTGACAGCACCAATCCGCTGGCCTTCCGCCA
CTATAACCCCGATGAAGTGGTGATGGGCAAGCGGATGGAGGACCATCTGCGTTTTGCCGTGGCCTACTGGCACACCTTCG
TGTGGCCGGGCACCGACCCGTTCGGCGGCAATACGTTTGAGCGTCCTTGGTTCAAGGATTCGATGGAGGCTGCCAAGCTG
AAGGCCGATGTGGCCTTTGAATTCTTCCAGTTACTCGGCACGCCTTACTATTGCTTCCATGATGCGGATGCGCGTCCTGA
AGGCGCGTCCTTTGCGGAAAATACCAAAAATCTCAATGAGATTGTCGATTACTTTGCCCAAAAGCAGGCCGATACCGGCG
TCAAGCTGTTGTGGGGTACGGCCAACATGTTCTCGCATCGTCGCTATATGTCGGGTGCCGCCACCAACCCGGACCCTGAC
GTCTTTGCCTTTGCCGCCGCAACCGTCAAGACTTGCCTGGATGCCACCCAGAAGCTGGGCGGCGAAAACTACGTGCTGTG
GGGTGGCCGTGAAGGCTATGAAACCCTGCTCAACACTGACCTGAAACAGGAACTGGACCATATGGGCCGTTTCCTCAACA
TGGTGGTGGAATACAAGCACAAGATCGGCTTCAAGGGCGCAATCCTGATCGAGCCGAAGCCGCAGGAGCCTTCCAAGCAT
CAGTATGATTATGATGTGGCCACCGTCTACGGCTTCCTCAAGACTTATGGTCTGGAGAAGGAAGTGAAGGTCAATATCGA
GCAGGGCCATGCCATTCTGGCCGGTCATACGTTTGAGCATGAACTGGCGCTGGCCAACGCGCTGGGCATTTTCGGTTCCA
TCGACATGAACCGCAATGACTATCAATCCGGCTGGGATACTGACCAGTTCCCCAACAACGTGCCGGAAATGGCGCTGGCC
TATTATCAGGTCCTGCAGGCGGGTGGCTTTACCTCCGGCGGCACCAATTTCGATAGCAAGCTGCGCCGCCAGTCCATCGA
CCCGGCGGATCTGCTGATCGGCCATATCGGCGGCATGGATTGCTGCGCCCGTGGCCTGAAGGCGGCTGCGAAAATGGTGG
AAGACAAGGCTCTGTCCGGCCCGCTTGCCAACCGTTATGCAGGCTGGAATAGCGACGGCGCCAAGGCCATGCTGGCCAGC
GGCACGCTGGAAAGCATTGCGGCCCGCGTTGAAGGCGAAAACATCAATCCGCAGCCGGTCTCCGGTCAGCAGGAATTGTT
GGAAAACGTCGTCAATCGCTACGTCTGA

Protein sequence :
MSTGFFGDITKIKYEGPDSTNPLAFRHYNPDEVVMGKRMEDHLRFAVAYWHTFVWPGTDPFGGNTFERPWFKDSMEAAKL
KADVAFEFFQLLGTPYYCFHDADARPEGASFAENTKNLNEIVDYFAQKQADTGVKLLWGTANMFSHRRYMSGAATNPDPD
VFAFAAATVKTCLDATQKLGGENYVLWGGREGYETLLNTDLKQELDHMGRFLNMVVEYKHKIGFKGAILIEPKPQEPSKH
QYDYDVATVYGFLKTYGLEKEVKVNIEQGHAILAGHTFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALA
YYQVLQAGGFTSGGTNFDSKLRRQSIDPADLLIGHIGGMDCCARGLKAAAKMVEDKALSGPLANRYAGWNSDGAKAMLAS
GTLESIAARVEGENINPQPVSGQQELLENVVNRYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 5e-103 52
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-103 52