Gene Information

Name : kpsF (Avi_3722)
Accession : YP_002550689.1
Strain :
Genome accession: NC_011989
Putative virulence/resistance : Virulence
Product : capsule expression protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 3085833 - 3086828 bp
Length : 996 bp
Strand : -
Note : -

DNA sequence : 
ATGAACAAGCTGGCTGTAAAACTCGTGGAAGCAAGCGCCATCAAGGCTGCATTGCGTGTCGTCGCTACCGAACAAAGCGG
GCTGGCGGCCCTGGAAGAGGCTTTGGCAGGGTATCTTGCCGGGCCGTTTTGCAACGCAATCGATGTTATCGGCAAAAGCT
CGGGCCGGGTGATCGTCTCTGGCGTCGGCAAGAGCGGCCACATCGGCGGCAAGATCGCGGCAACGTTCGCCTCGACAGGC
ACACCGGCTTTCTTCATCCATCCGGCGGAAGCCAATCATGGCGACCTCGGCATGATTGCCCGTGACGATGTGGTGATTGC
CCTGTCCTGGGGCGGCGAAAGCACCGAGCTGAACGGAATCCTGTCCTTCACTCGCCGGTTTTCCATTCCACTGATAGCCA
TTACCGCCGGTGAGCAATCCACGTTGGCACGTGAAGCCGATATCGTGCTTTTGATGCCCAAGGTGCAGGAAGCCTGCCCG
CATGGCTTGGCGCCGACCACCTCCACCATGATGCAGATGGCGCTGGGCGATGCGCTGGCGCTGGCGCTGCTGGAAGCTCG
TGGCTTCGGGCCGAATGATTTCAAGACCTTCCATCCGGGCGGCAAGCTGGGCGCGATGCTGACTCATGTCGGCGACATGA
TGCATATCGGCGAGGACGTGCCGCTGGTGCCGGAAGGCACATCGGTGCCGGAAGCGATTATCATGCTATCGCAGAAGCGT
TTTGGCTGCGTCGGCGTCACCGACAGCGCTAACCGGTTGGTCGGTATCATCACCGATGGCGATATTGCCCGTAACCTCAA
CCGCAATCTCGGTGAGCGGATGGTGGAAGAGGTGATGACCCGTCACCCAAAGACGGTTCACACCGAAACACTTGCGACCA
CCGCCATGGCGATCCTCAACCAGCACAATATTTCGGCGCTGTTTGTGACCGATGAAGACGGTGTGCCAAACGGCATCATC
CACTTCCATGATTTGTTGCGGATTGGTGTGGCTTAA

Protein sequence : 
MNKLAVKLVEASAIKAALRVVATEQSGLAALEEALAGYLAGPFCNAIDVIGKSSGRVIVSGVGKSGHIGGKIAATFASTG
TPAFFIHPAEANHGDLGMIARDDVVIALSWGGESTELNGILSFTRRFSIPLIAITAGEQSTLAREADIVLLMPKVQEACP
HGLAPTTSTMMQMALGDALALALLEARGFGPNDFKTFHPGGKLGAMLTHVGDMMHIGEDVPLVPEGTSVPEAIIMLSQKR
FGCVGVTDSANRLVGIITDGDIARNLNRNLGERMVEEVMTRHPKTVHTETLATTAMAILNQHNISALFVTDEDGVPNGII
HFHDLLRIGVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 5e-43 44
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 5e-43 44
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 9e-43 44