Gene Information

Name : Avi_3407 (Avi_3407)
Accession : YP_002550452.1
Strain :
Genome accession: NC_011989
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 2820873 - 2822531 bp
Length : 1659 bp
Strand : -
Note : -

DNA sequence :
ATGGCTTTGAAACCTGACGCTCTTCCCGAAGACCTTGCCAGCGCCTATTTGGCGCTACTGGCCAATCACGATGTCGTCGT
CAACGAGCGGAACATTGCAGTCGCGGAGGCTGCCAATGCGCAAGCCATGCTATCTGATCGCGATGCGCGGATCGCCAGTC
TTGAATTGCGGATCGACAAGCTCAAGCGCGAACTACACGGCCAGAGCAGTGAACGCTCAGCGCGGCTGATTGATCAGTTG
GAATTGCAGCTCGAAGAGCTGGTGACGGCAGCGAGCGAAGATGAAGTTGCAGCGCAGGCAGCGGCGGCCAAAACGGCAAA
CGTGCGTCCGTTTGTGCGCAAGCGTCCAGTTCGCAAGCCTTGGCCGGACGATGTCGAGCGCGAGCGCGTGGTCATTGCCC
CTCCGAGCACCTGCGCGTGTTGCGGCGGGTCGCGCCTGTCGAAACTGGGTGAGGACGTTACCGAGACGCTGGAAGAAATT
CCGCGCCGCTTCAAGGTCATCGAGACGGTGCGCGAGAAGTTCACCTGCCGTGACTGTGAGGCCATCAGCCAGTCGCCAGC
CCCTTTCCATGCCACCCCGCGTGGCTTCATAGGACCCCAACTGCTGGCGACGATCCTGTTCGACAAGTTCGGCATGCATA
GCCCGCTCAATCGGCAGAGTACCCGGTTCAAATGCGAGGGGATCGATCTGTCGACCTCAACGCTTGGCGATCAGGTCGGG
CTTGGAACATCGGCTCTCATGCCACTGTTCGATCTCATCGAGGCCCAGGTCTTTGCGGCTGAGCGCCTCCACGGTGACGA
CACCACCATTCCCATCTGGGGCAAAAGCAAATGCACAACTGGGCGCATTTGGACCTATGTGCGTGATGATCTGCCCTTCA
AGGGGGATGCACCCCCGGCTGCGGTTTATTACGCCTCGAGCAACCGCCGAGGCGAGCATCCGCAAAGACATCTGGCCAGA
TATGGCGGCATTCTGCAGACGGATTGTTACAACGGGTTCGAGCCGATATCGATTGCCGCACAGAAAGACGTGCCGATCAC
GTTTGCTTTTTGCCATGCGCATGCACGACGAAAATTCTTTGAGTTGGCCGATCTCGAAAAAAGTGCGCGCGACAGCAAGC
GCAATGGCAGGCCGATCTCCCCGATCGCGCTTGAGGCCGTCAAACGCTTCGACGCGCTGTTTGACATCGAGCGGCAGATC
AATGGGCTGAGCGCTGAAGAGCGATTGGCGGTGCGACAGCACAAAAGCAGGCCGCTGTTCGACGACATGCATGCGTGGCT
GCAACGCGAGCGCGCCACGCTCAGCAGATCATCCGACCTCGTCAAAGCCATGGACTATATGCTCAAGCGCTGGGACGGCT
TTGCGCTATTCCTGGAAGACGGCCGAATTTGCCTCACAAATAATGCCGCCGAGCGCGCTTTAAGAGGTATTGCATTGGGA
CGCCGCAACTGGACCTTCGCCGGGTCCCAGCGTGGGGCCGAGCGCACTGCCGTCATGCTCACACTCATCACAACCTGCCG
TCTTAATGATGTCGACCCAAAGGCATGGCTTGCCGATGTGTTCACCCGCATCGCCGATCTCCCCGTCACCCGCCTGCACG
AACTGCTGCCTTGGCAATGGAAGTTGCGCAAAGGGATAGCTATAGCGCCGGTCGGGTGA

Protein sequence :
MALKPDALPEDLASAYLALLANHDVVVNERNIAVAEAANAQAMLSDRDARIASLELRIDKLKRELHGQSSERSARLIDQL
ELQLEELVTAASEDEVAAQAAAAKTANVRPFVRKRPVRKPWPDDVERERVVIAPPSTCACCGGSRLSKLGEDVTETLEEI
PRRFKVIETVREKFTCRDCEAISQSPAPFHATPRGFIGPQLLATILFDKFGMHSPLNRQSTRFKCEGIDLSTSTLGDQVG
LGTSALMPLFDLIEAQVFAAERLHGDDTTIPIWGKSKCTTGRIWTYVRDDLPFKGDAPPAAVYYASSNRRGEHPQRHLAR
YGGILQTDCYNGFEPISIAAQKDVPITFAFCHAHARRKFFELADLEKSARDSKRNGRPISPIALEAVKRFDALFDIERQI
NGLSAEERLAVRQHKSRPLFDDMHAWLQRERATLSRSSDLVKAMDYMLKRWDGFALFLEDGRICLTNNAAERALRGIALG
RRNWTFAGSQRGAERTAVMLTLITTCRLNDVDPKAWLADVFTRIADLPVTRLHELLPWQWKLRKGIAIAPVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-72 43
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 2e-72 43
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 7e-72 43
unnamed AAC31494.1 L0015 Not tested LEE Protein 9e-73 43
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 7e-72 43
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 9e-73 43
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 2e-72 43
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-72 43
tnp AEA34686.1 transposase Not tested Not named Protein 2e-73 43
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-72 43
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 2e-72 43
unnamed AAL57570.1 unknown Not tested LEE Protein 6e-73 43
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 6e-72 43
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 2e-73 42
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 8e-66 41
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 1e-63 41
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 1e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avi_3407 YP_002550452.1 transposase VFG0793 Protein 5e-73 43