Gene Information

Name : tnp (Avi_2751)
Accession : YP_002549993.1
Strain :
Genome accession: NC_011989
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 2293347 - 2293637 bp
Length : 291 bp
Strand : +
Note : -

DNA sequence : 
ATGCAACGAAGAAAGTTCAGCCGCGAATATAAGCTTGAAGCGGTGAGATTGGTGCGGGAGCGCAGCGTCAGTGTTGCGCA
GGCGGCCCGCGACATGGATGTCCACGAGAACGTTTTGCGCAAATGGGTCAAGGAATATGGTTCTGATCCAGTGCAGGCCT
TCCCAGGCCATGGCCAAATGAAGCCCGAGCAGCTTGAGATCGAGAGGCTGCGCAAGGAAGTCGCCAAGCTGAAAGCGGAG
CGTGATATCTTAAAAAAGGCCGCCGCCTACTTTGCGAAGGACGTGATATGA

Protein sequence : 
MQRRKFSREYKLEAVRLVRERSVSVAQAARDMDVHENVLRKWVKEYGSDPVQAFPGHGQMKPEQLEIERLRKEVAKLKAE
RDILKKAAAYFAKDVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAC67553.1 hypothetical protein Not tested Type-IVc SCCmec Protein 2e-09 41
SAR0081 YP_039548.1 transposase Not tested Type-II SCCmec Protein 2e-09 41
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-12 41
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-12 41
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 1e-12 41
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-12 41
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-12 41
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-12 41
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 1e-12 41
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 2e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnp YP_002549993.1 transposase VFG1123 Protein 5e-13 41