|
Name : Avi_1402 (Avi_1402) Accession : YP_002549006.1 Strain : Genome accession: NC_011989 Putative virulence/resistance : Unknown Product : ABC transporter nucleotide binding/ATPase (oligopeptide) Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1180977 - 1182581 bp Length : 1605 bp Strand : - Note : - DNA sequence : ATGGACAAGACCGAAAACCAGACGGTGCTGACCGTCAAGGACCTGAAGGTCACATTCACCACGCCCGATGGCGAGGTGAA TGCCGTCAAGGGCATTTCCTTCGATGTCAAGAAAGGTGAAACGCTGGCCATCGTCGGTGAATCCGGCTCCGGCAAAAGCC AGACGATGATGGGCATTATGGGGCTTCTGGCCTCGAATGGACAGGTGGCAGGCTCGGCTCGCTACGGCGAAACCGAACTG GCAGGTGCCAGTATCTCGACGCTGAACGACGTGCGCGGCTCGAAGATCACCATGATCTTTCAAGAGCCAATGACCTCACT CGATCCGCTCTACACGGTCGGCAAGCAGATTTCCGAGCCGTTGATTTTTCATCGCCGCATGAGCCGGTCGAAGGCGCGCG CCCGCGTGCTGGAATTGCTCAAGCTGGTCGGCATCCCGGAACCGGAGCGTCGGATCGACAGCTACCCCCATGAATTGTCC GGCGGCCAGCGCCAGCGCGTGATGATCGCCATGGCGCTCGCCAATGAGCCGGACCTGCTGATTGCCGACGAGCCGACCAC GGCGCTGGACGTAACGATCCAGGCGCAGATCCTCGATCTTCTCGCCGATTTGCAAAAGCGCTTCGGCATGGCCATCGTGT TGATCACCCACGACCTCGGTGTGGTCAAGCATGTTGCCGACCGAGTGGCGGTCATGCGGCGCGGCGAAATTGTCGAACAG GGCAGCCGGGACGATATTTTCGACCGCCCGCAGGCCGATTACACCAAGATGCTGCTGGCCGCCGAACCATCAGGCTCCAA GGCCGCACCGCCCTCCGATGCGCCGGTCATTCTCGAAGGCCGCAATGTCGTGGTGGATTTCAACATCAGCTCCGGCATCC TGTTCAAGGGCAATCGAAAATTCCGGGCCGTCGATCATGTCAATCTGAAGCTTCGCCAGGGCCAAACCATTGGCATTGTC GGCGAATCCGGTTCGGGCAAATCCACGCTGGGACGGGCGCTGCTAAAGTTGCTCTCCGCCGATGGCCGGTTCAGCTTCGA GACCACGGATATTTCCGGCCTTGACCGCGCCGGGATGCGTCCCTTCCGTCGTCAATTGCAGCTGGTGTTTCAGGATCCCT ACGGCTCGCTCTCGCCCCGCCAGACGGTCGGCGAGATCATCACCGAAGGGCTTTACGTGCATGAGCCTGATCTTAGCAAG GCGGAACGCGACAAGCGTGCCATTGCCGCCTTGAAGGAAGTCGGCCTCGATCCCGCCTCGCGCAATCGCTATCCGCATGA GTTTTCCGGCGGCCAGCGTCAGCGTATCGCCATCGCCCGCTCGATGATCCTCAAGCCGAAAGTGGTAATCCTTGATGAAC CGACCTCGGCCCTGGACCGTTCGGTGCAGCGGCAGGTGATCGAGTTGCTACGCGACCTGCAACAGAAACACGACCTGTCC TACGTGTTCATCAGCCACGATCTGTCGGTGATCAAGGCGATTTCCGACCATGTGATCGTGATGAAGAACGGAAAGATCGT TGAAGAAGGGCCGACGGAAGACATTTTCGAAAGCCCCGCCGAGGACTATACCAAGGCCCTGATTGCGGCTGCGTTTACGC ATTGA Protein sequence : MDKTENQTVLTVKDLKVTFTTPDGEVNAVKGISFDVKKGETLAIVGESGSGKSQTMMGIMGLLASNGQVAGSARYGETEL AGASISTLNDVRGSKITMIFQEPMTSLDPLYTVGKQISEPLIFHRRMSRSKARARVLELLKLVGIPEPERRIDSYPHELS GGQRQRVMIAMALANEPDLLIADEPTTALDVTIQAQILDLLADLQKRFGMAIVLITHDLGVVKHVADRVAVMRRGEIVEQ GSRDDIFDRPQADYTKMLLAAEPSGSKAAPPSDAPVILEGRNVVVDFNISSGILFKGNRKFRAVDHVNLKLRQGQTIGIV GESGSGKSTLGRALLKLLSADGRFSFETTDISGLDRAGMRPFRRQLQLVFQDPYGSLSPRQTVGEIITEGLYVHEPDLSK AERDKRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIARSMILKPKVVILDEPTSALDRSVQRQVIELLRDLQQKHDLS YVFISHDLSVIKAISDHVIVMKNGKIVEEGPTEDIFESPAEDYTKALIAAAFTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-101 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-83 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-83 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-83 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-83 | 42 |
