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Name : Avi_5116 (Avi_5116) Accession : YP_002547011.1 Strain : Genome accession: NC_011988 Putative virulence/resistance : Unknown Product : ABC transporter nucleotide binding/ATPase (oligopeptide) Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 104266 - 105933 bp Length : 1668 bp Strand : - Note : - DNA sequence : ATGGCAAACACCACCAATGCATTGGCACCTGATCAGAGGCACGATCACACCAGCCTTCTCGGCACGCCGATTATCGATGC CCGCCAACTGGCCGTCTCCTTCAAGGTGGAAGGCGGCACAGTCGAGGCGGTCAAGAATGTCTCTTTCCAGCTCTACAGAG GCGAAACCATTGCCGTTGTTGGCGAATCCGGTTCTGGAAAGTCGGTCACGGCCCGCAGCATCATGGGGCTGTTGACCAAG CGCGCCACCTTGTCGGCTCGTTCCAGCATTGCCTACGATGGGCAAAACATCCTGAAGTTTTCGGATCGGCAACGGCGAGC ACTTCGCGGCAATCGCATCTCGATGATTTTTCAAGAGCCGATGAGCTCGCTCAATCCGGTCTACACCATCGGCACACAGA TCGCAGAAGCCATCCGCGTGCACCAGAAAATGAGCAGCAAGCAAGCTTTTGCGCGCACATTGGAGCTGTTGCGTCAGGTG CAAATCCCGGAGCCGGAGGCCCGCCTCAACCAATATCCGCATCAATTGTCCGGCGGTCAGCGTCAGCGCATCATGATTGC CATGGCACTGGCCAACAACCCGGATGTGCTGATTGCCGATGAACCCACCACGGCGCTGGACGTGACCGTGCAGGCGCAGA TTCTCAACCTGATCCGCGATTTGCAAAAAAGCCTAGGCATGGCGGTGATCCTGATCACCCATGATCTCACCGTCGTTCGG CAATTTTCAGACTATGTCTATGTGATGCAAAACGGCGAGGTGAAGGAACACAACACCACAACGGCGCTGTTTGAACATCC ACAACATCCCTACACCCGCCATCTGCTGGCATCGGAACCAAAGGGCACGGCCAATCCCATGCCGGTCGACTCTACCACCA TTCTGGAAGGGCGCGATGTGCGTGTGTCTTTCATGCTAAAGCATGGTGGCTTTTTCAAACCACAGTTGAAAGAGCTGGTC GCCGTCAACAGCCTTTCCATCACCCTGCATCGCCATGAAACGCTGGGTTTGGTGGGCGAGAGTGGTTCCGGCAAAACCAC CTTTGGCCAAGCCCTTGTCAAACTGATGAGTGTTGATAGCGGCAAGATCCTGTTCGACGGCCAAGCCATAGAGAACAACA GCCGCGAACAAATGCGACCTTTGCGCTCGCGTATCCAGGTGGTGTTTCAAGACCCGTTTTCTTCACTCAACCCGCGCATG TCGGTAGGCCAGATCATTGAGGAAGGCTTGATCGTCAACAATATCGGCACAAGCCGCAGTGAGCGGCTGGACCGCGTGCG CGAGGCGCTGATCAGCGCCGGAATGCCCGGCAACATCCTGTCGCGGTTTCCGCATGAATTTTCCGGTGGCCAACGCCAGC GGATTGCCATTGCGCGGGCGGTGGCGCTGGAGCCGGAATTCATCCTGCTGGATGAGCCGACATCGGCGCTCGATTTATCC GTTCAAGCCCAGATCATCGACCTGTTGCGCAAGCTTCAGGATGAAAAGGGCCTGAGCTATCTCTTCATTTCCCATGATCT CAAGGTTGTCCGCGCGCTTTGCCACCGGGTTGCGGTGATGCAGCACGGGCAGATCGTTGAGCAAGGACCTGTTGAGGACA TCCTCAGCCATCCCAAAACCGCCTACACCCAGCGGCTCGTCAGAGCTGCTTTCAACGTCGCCACATAA Protein sequence : MANTTNALAPDQRHDHTSLLGTPIIDARQLAVSFKVEGGTVEAVKNVSFQLYRGETIAVVGESGSGKSVTARSIMGLLTK RATLSARSSIAYDGQNILKFSDRQRRALRGNRISMIFQEPMSSLNPVYTIGTQIAEAIRVHQKMSSKQAFARTLELLRQV QIPEPEARLNQYPHQLSGGQRQRIMIAMALANNPDVLIADEPTTALDVTVQAQILNLIRDLQKSLGMAVILITHDLTVVR QFSDYVYVMQNGEVKEHNTTTALFEHPQHPYTRHLLASEPKGTANPMPVDSTTILEGRDVRVSFMLKHGGFFKPQLKELV AVNSLSITLHRHETLGLVGESGSGKTTFGQALVKLMSVDSGKILFDGQAIENNSREQMRPLRSRIQVVFQDPFSSLNPRM SVGQIIEEGLIVNNIGTSRSERLDRVREALISAGMPGNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDLS VQAQIIDLLRKLQDEKGLSYLFISHDLKVVRALCHRVAVMQHGQIVEQGPVEDILSHPKTAYTQRLVRAAFNVAT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 8e-100 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-75 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-75 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-75 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-75 | 41 |
