Gene Information

Name : Avi_5882 (Avi_5882)
Accession : YP_002547639.1
Strain :
Genome accession: NC_011988
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 892196 - 893077 bp
Length : 882 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAGGAAATCTTTTGCAGCTTCGGCATCGATGTGGATGCGGTGGCCGGCTGGCTCGGCTCTTACGGCGGCGAGGA
TTCGCCTGACGATATTTCCCGTGGTCTGTTTGCCGGTGAGGTCGGCGCACCGCGCCTGCTGAAATTGTTCGAACGCTTCG
GTATCAAGACCACCTGGTTCATTCCCGGCCATTCCATCGAGACCTTCCCGGAACAGATGCAGGCTGTGGCCGATGCAGGC
CATGAAATCGGCATTCATGGCTATACCCATGAAAACCCGATTGCCATGACCCGCGAACAGGAAACCGAGGTGCTGGACAA
GTGCATCGAGCTGGTCACAAGGCTGTCGGGCAAGCGCCCGACCGGCTATGTCGCGCCCTGGTGGGAATTTTCCAATGTCA
CCAATGAATTGCTGCTGGAGCGGGGCATCAAATACGACCACTCGCTGATGCATAATGATTTTACGCCCTATTATGTGCGC
GTTGGCGATAGCTGGACCAAGATTGACTATTCCAAGAAGCCCTCCGACTGGATGGTGCCTTTGAAGCGTGGCCACGAGAC
CGACCTGATCGAAATTCCGGCCTCCTGGTATCTCGATGACCTGCCGCCGATGATGTTCATCAAGAAATCACCCAACAGCC
ACGGCTTCGTCAATCCGCATGATATCGAGCAGATCTGGCGCGACCAGTTCGATTGGGTCTATCGTGAAATGGATTATGCG
GTTTTCCCGATCACCATTCACCCTGACGTTGCCGGACGCCCGCAGGTGTTGATGATGCTGGAGCGGTTGTTTGCCCATAT
GAGCAAGCATCCGGGGGTGAAATTCGTGACCATGAACGAGATCGCCGACGATTTCGCAAAGCGCTTTCCGCGCAAGAAGT
AA

Protein sequence :
MAKEIFCSFGIDVDAVAGWLGSYGGEDSPDDISRGLFAGEVGAPRLLKLFERFGIKTTWFIPGHSIETFPEQMQAVADAG
HEIGIHGYTHENPIAMTREQETEVLDKCIELVTRLSGKRPTGYVAPWWEFSNVTNELLLERGIKYDHSLMHNDFTPYYVR
VGDSWTKIDYSKKPSDWMVPLKRGHETDLIEIPASWYLDDLPPMMFIKKSPNSHGFVNPHDIEQIWRDQFDWVYREMDYA
VFPITIHPDVAGRPQVLMMLERLFAHMSKHPGVKFVTMNEIADDFAKRFPRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 2e-117 78