Gene Information

Name : Avi_5697 (Avi_5697)
Accession : YP_002547494.1
Strain :
Genome accession: NC_011988
Putative virulence/resistance : Unknown
Product : ABC transporter nucleotide binding/ATPase (oligopeptide)
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 720612 - 722318 bp
Length : 1707 bp
Strand : -
Note : -

DNA sequence :
ATGACATCGAACGTAAAGCCCCTCTTGCAGGTCAAGAACCTCAGTGTCGAATTTCCCGTGCATCGCCAGGTGATCCAGGC
TGTCCGCAATGTCTCCTTCGACGTCTATGAAGGCGAAACCCTTTGCGTGCTGGGCGAAAGCGGCTCGGGCAAAAGCGTTA
CCGCCCGCGCCATCTTGAAACTGCTGGCCGATCCGGGTCGCCTGACATCGGGTGAGATCCTTCTCGCTGGCGAAAACGGC
AAAGCCGACCGCGACATCGCCAAGCTCAAATCCTCCAGCCAGGACATGCAATCGATCCGGGGCGGTCAGATCGCCATGAT
CTTTCAGGAGCCGATGACCTCGCTATCGCCCGTACATCGGATCGGCGAGCAGATCATCGAAGCGATCCTGCTGCATGAGA
AAATGGACAAGGGTGAGGCGCGCGTCCGCGCCATCGACCTGTTGCGTCAGGTGCGCATTCCCGATCCGGAAACCGCCATC
GACCGCTATCCCTTCGAATATTCAGGCGGCATGCGCCAGCGCGCCATGATCGCCATGGCGCTGTCGTGCAATCCGCGCCT
GTTGATTGCCGATGAGCCGACCACGGCGCTCGACGTCACCACCCAGGCCGAGATTCTCGACCTGATCGTCTCGCTTCAGC
GTGAGCGCGGCATGGCCGTGCTGTTCATCACCCACGATATCGGCGTGGTGGCTGAGATCGCCGACCGGGTGATGGTGATG
TATCGCGGGGAAAAGGTCGAGGAAGGGCTGGCGGAACAGGTTCTGCGCCGTCCCGCCGCTGCCTATACCGCAGCGCTTCT
GGGCGCCGTGCTGAAGCTGGAAACACCTTTGCCGCGCCGCACGCTTCCCGCCGCCGCCAAGCCGCTGATGGAGGTTTCCG
ACCTGCACTTGCAGTTCGGCTCGCGCCGCCGCTGGGGAGTGAAACAGACATTCGGCGTTAAGGCTATCGACGGTGTTAGT
CTAACGCTAGCCCCCGGCGAAACCCTTGGGATCGTCGGAGAAAGCGGATCGGGCAAGACCACGCTTGGCCGCACCATGCT
GCAAATCTACAAGCCCACGGCTGGCCATGTGCATTATGCCGATGCCAACGGGCAAGACGTTGACATCGCCAAAGCATCGC
GCAACACCATGCGTCATCTCTATACGGAAATGCGCATGGTGTTTCAGGACCCACATTCTTCGCTCAATCCACGCATGACG
GTGTTTGAAACCATCGCCGAGCCGATGCGGATGATGGGCCTGACCACCACCCAGATGCGGGAACGGGTGGAATATCTGCT
CGACCGCGTTGGCCTGCCAACCAATGCCATCAACCGCTATCCGCATGCCTTTTCCGGTGGTCAGCGTCAGCGTATTTCCA
TCGCCCGCGCCATCGCGCCCAATCCACGGCTGATCATCGCCGATGAGCCGACCTCGGCGCTGGACGTGTCGCTGCGCCAT
CAGGTTCTCGATCTACTGGCCGAATTGCGGGCCGAGCTTGGCATCAGCTTCATCTTCATCAGCCATGACATTACCGTGGT
GCGCTATTTCTGCGACCGGGTGGCGGTGATGCAAAAGGGCAAGATCGTCGAAATGGGCGATGCCGACGACATCTGCCTGC
GGCCCCAGCATCCCTATACCCAAAAGCTGATCGCCTCAGTGCCGCAGCCCGATATGTCGAGACGGCGCAAACCGCTGATC
ATGCCGCAGGCGATGGGGGTGCAATGA

Protein sequence :
MTSNVKPLLQVKNLSVEFPVHRQVIQAVRNVSFDVYEGETLCVLGESGSGKSVTARAILKLLADPGRLTSGEILLAGENG
KADRDIAKLKSSSQDMQSIRGGQIAMIFQEPMTSLSPVHRIGEQIIEAILLHEKMDKGEARVRAIDLLRQVRIPDPETAI
DRYPFEYSGGMRQRAMIAMALSCNPRLLIADEPTTALDVTTQAEILDLIVSLQRERGMAVLFITHDIGVVAEIADRVMVM
YRGEKVEEGLAEQVLRRPAAAYTAALLGAVLKLETPLPRRTLPAAAKPLMEVSDLHLQFGSRRRWGVKQTFGVKAIDGVS
LTLAPGETLGIVGESGSGKTTLGRTMLQIYKPTAGHVHYADANGQDVDIAKASRNTMRHLYTEMRMVFQDPHSSLNPRMT
VFETIAEPMRMMGLTTTQMRERVEYLLDRVGLPTNAINRYPHAFSGGQRQRISIARAIAPNPRLIIADEPTSALDVSLRH
QVLDLLAELRAELGISFIFISHDITVVRYFCDRVAVMQKGKIVEMGDADDICLRPQHPYTQKLIASVPQPDMSRRRKPLI
MPQAMGVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-74 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-74 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-74 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-74 42
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 2e-95 41