Gene Information

Name : Avi_5467 (Avi_5467)
Accession : YP_002547302.1
Strain :
Genome accession: NC_011988
Putative virulence/resistance : Resistance
Product : ABC transporter nucleotide binding/ATPase (aliphatic sulfonate)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1116
EC number : -
Position : 467837 - 468664 bp
Length : 828 bp
Strand : -
Note : -

DNA sequence :
ATGACCGCAACAACAGTGACGCGGCTTCGGCCAATTCAGGAAGCACATCCTGCAACAAGACAGGAACAGGCATCCCAACC
GGTGCTTGCCAGCGCCCGCCCGGCTTTTTCCTTCCGCAATGTCCGAAAGAGTTTCGGGACACAGACCGTGCTTGATGGCA
TAAACCTCGATGTCGCCGAAGGTGAGTTCCTGGCGATCATCGGCAAGAGCGGCTGTGGCAAAAGCACCCTGCTGCGGTTG
CTGGCCGGGCTGGACAAACCAAGTTCCGGCGAACTTATCCATCATGCCGACAAGAGCGATGCTGCCCGGGTTCGAATGAT
GTTTCAGGAACCGCGTCTTCTGCCCTGGGCAAAGATCGACGACAATGTCGCCGTCGGACTGACCGGAATTGCCAAGGGCA
AGGAAGCGCTTTCGGCGGCCCGCGCCCTGTTGGAAGAGGTCGGCCTTGGCGCACGGGCCAGCGAATGGCCCTCCGTTCTC
TCAGGCGGCCAGAAACAGCGCGTCGCGCTTGCCCGCGCCTTGGCGGCGCATCCGCATATCCTGGCGCTGGATGAACCGCT
GGGCGCGCTCGATGCCCTAACCCGGATCGAAATGCAGCAATTGCTGGAACGGATCTGGCAAAAGCAACGGTTCACGGCGG
TGCTGGTCACCCATGACGTGTCGGAAGCCGTCGCCCTCGCCGATCGGATCGTCGTCATCGACGCCGGACGCATTGCGCTC
GATCTCAAGGTTTCACTGCCACGCCCAAGGCGGCATGCCACGGCAGAATGCGCGGCAATCGAAGCACAGATATTGGGGAA
ACTGCTGGGAGAAGCGGCCCAAGCGTGA

Protein sequence :
MTATTVTRLRPIQEAHPATRQEQASQPVLASARPAFSFRNVRKSFGTQTVLDGINLDVAEGEFLAIIGKSGCGKSTLLRL
LAGLDKPSSGELIHHADKSDAARVRMMFQEPRLLPWAKIDDNVAVGLTGIAKGKEALSAARALLEEVGLGARASEWPSVL
SGGQKQRVALARALAAHPHILALDEPLGALDALTRIEMQQLLERIWQKQRFTAVLVTHDVSEAVALADRIVVIDAGRIAL
DLKVSLPRPRRHATAECAAIEAQILGKLLGEAAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 5e-40 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avi_5467 YP_002547302.1 ABC transporter nucleotide binding/ATPase (aliphatic sulfonate) NC_012469.1.7686878. Protein 4e-21 41