|
Name : Avi_5294 (Avi_5294) Accession : YP_002547161.1 Strain : Genome accession: NC_011988 Putative virulence/resistance : Unknown Product : ABC transporter nucleotide binding/ATPase (peptide) Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 297354 - 299003 bp Length : 1650 bp Strand : + Note : - DNA sequence : ATGCCGAAATCTGTTCAAGACGATGCAATCGAGGCAGGTACGCTGCTGTCCGTGCAAGGATTGACTGTCGGCTTGCCGCC GGGCATGGATCGCCGATATGCGGTGGAAGATATGTCCTTCGACCTGAAGGCTGGAGAAATTCTCTGCATTATCGGCGAGT CCGGCTCGGGCAAATCCGTGACGGCCAATGCCACGATGGGGCTTCTGGCGCAGTCTCTCCACATTGTATCCGGCAGCATC ATGCTGGAGGGCCAGGAACTGGTCGGTGCCGATGCCGCCACCTTGCGTGCGTTGCGTGGCCGGATCGTTTCGATGATTTT CCAGGACCCGTTGTCGGCGCTCAACCCTTTGATGACCGTCGGCGATCAGATCGCCGAGGTCATGGAAGCCCACGGCATTG GCACGCAGCAGGAGCGCCGGGCGCGTGTTCTCGACCTGATCACCGAAGTGGGGCTGCCGGACCCGGAACTGATGCAGCAT CAATATCCCTTCCGATTGTCCGGCGGTCAACGACAGCGCGTGATGATTGCCATGGCGCTGGCGCTTGAACCGAAGGTGTT GATCGCTGATGAGCCGACCACCGCCCTCGACGTGACGACACAGGCGCAGATTCTTGAGTTGATCGCGTCTATCCAGCGCC GCAAGCAGATGAGCGTGATGTTCATCACTCATGATTTCGGCGTGGTGGCCGAGATTGCCGACCGTGTGATTGTCATGGAA AAGGGGCATGTCGTCGAACAAGGGTCGGCTTCCGTGGTGCTGAAAAGCCCTGATCATCCCTATACGCAACGGCTGATCGC CGCCGTGCCGCGGATGCGCGCAAGCGACCGTGAGAATGAGGCGGATACGCCTGTTGTTCTGGAGGCCCGCAATCTCTGCA AGACCTATGGGACTGGTTCAGGTTTCCTGTCGAAGGGCCGGGTGATCAAGGCGGTCGATGATGTCTCCTTCACGATCGCC AAAGGCCGGACGCTGGGTATTGTCGGGGAATCCGGGTCGGGGAAATCATCGCTCGGCCGTCTTCTCGTCAAACTGATGAA CAGCGATTCCGGCGAAATCCTCTTCGGTGGCCGTGATATTGCACCCCTGTCGGAAGAGGCTTTCCGCTCGATGCGGCCCT ATATCCAGATGATCTTTCAAGATCCTTTCGCCTCCCTCAATCCGCGCCAGACCATCGGTCGCATCTTGACCGTCGGGCCG GTGGCACAGGCGACGCCCATTCACGAGGCGCGAACACGCGCGATGCGGCTTCTGGAGCGGGTCGGCCTCGATGCAGGCGC CTATGATCGGTATCCACATGAGTTTTCAGGCGGCCAGCGCCAGCGTATCGGTATAGCCCGCGCATTGATGTTCAATCCCA TGCTGATCGTAGCGGATGAAGCCGTTTCGGCGCTCGATGTTTCGATCCAGGCGCAGATCCTTCAGCTGCTGACGGAAGTG CAGCAGGAAATGAAACTGGCCATGGCCTTTATCACCCATGATCTGCGCGTCGCCAGCCAGATCTGCGATGAGATCGCGGT GATGTATAAGGGCCGTATTGTCGAATACGGACCACCCTCGCAGATCTTCCGCAACCCTACCCATGATTATACCCGCCAAC TCGTTTCCGCTATTCCCGGAACCGAATGGGAGCCTGCCGTGATGGTGTAA Protein sequence : MPKSVQDDAIEAGTLLSVQGLTVGLPPGMDRRYAVEDMSFDLKAGEILCIIGESGSGKSVTANATMGLLAQSLHIVSGSI MLEGQELVGADAATLRALRGRIVSMIFQDPLSALNPLMTVGDQIAEVMEAHGIGTQQERRARVLDLITEVGLPDPELMQH QYPFRLSGGQRQRVMIAMALALEPKVLIADEPTTALDVTTQAQILELIASIQRRKQMSVMFITHDFGVVAEIADRVIVME KGHVVEQGSASVVLKSPDHPYTQRLIAAVPRMRASDRENEADTPVVLEARNLCKTYGTGSGFLSKGRVIKAVDDVSFTIA KGRTLGIVGESGSGKSSLGRLLVKLMNSDSGEILFGGRDIAPLSEEAFRSMRPYIQMIFQDPFASLNPRQTIGRILTVGP VAQATPIHEARTRAMRLLERVGLDAGAYDRYPHEFSGGQRQRIGIARALMFNPMLIVADEAVSALDVSIQAQILQLLTEV QQEMKLAMAFITHDLRVASQICDEIAVMYKGRIVEYGPPSQIFRNPTHDYTRQLVSAIPGTEWEPAVMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-81 | 43 |
