Gene Information

Name : phoP (Avi_5125)
Accession : YP_002547019.1
Strain :
Genome accession: NC_011988
Putative virulence/resistance : Virulence
Product : two component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 114274 - 114942 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCGTACTGCTCGTCGAAGACGATGAAGACCTGAGTGGCCGGATCGCCACTGCGCTCAGGTCGGAGAACTTCGTGGT
CGACATCGCCCGCAATGGCGAGGACGCGCTCCATGCCGGACTGACCGAGTTGTTCGACATTGCCGTGCTTGATCTCGGGT
TACCGAAGATCGATGGCGTCACGGTTCTAAAGGGGTGGCGCGAAAGCGAACGCAATCTCCCCGTCCTTGTCCTGACGGCG
CGTGACGGCTGGCCGGACAAGGTATCGAGCTTCAAGGCCGGTGCCGACGACTTCCTTGCAAAGCCGTTCAAAATTGAAGA
GCTGGTGCTGAGGCTGCGGGCCTTGGTGCGCCGGGCAACCGGCCATGCTTCTTCACGCATTCAATGTGGCGCACTGATGT
TTGACGCCCAGCTTGGCACATTTGAGCTGAATGGACTTCCAGTCAAACTGACTGCGCTGGAATGGCGGGTCCTGTCATGC
CTCATGCTCAGGAAGGAGATGGTTGTTGATCGGCGCGAGCTGAATGAGCGGGTTTACGACGGAGACGCTGAGGTGGATTC
CAACTCCATCGAAGTCATCATCGCAAGGCTGCGCAAAAAGCTTGGTTCTGAAATTATCGAGACCGTCCGCGGTCGGGGCT
ATATGCTGACAGCGCCGGTGCAATCATGA

Protein sequence : 
MRVLLVEDDEDLSGRIATALRSENFVVDIARNGEDALHAGLTELFDIAVLDLGLPKIDGVTVLKGWRESERNLPVLVLTA
RDGWPDKVSSFKAGADDFLAKPFKIEELVLRLRALVRRATGHASSRIQCGALMFDAQLGTFELNGLPVKLTALEWRVLSC
LMLRKEMVVDRRELNERVYDGDAEVDSNSIEVIIARLRKKLGSEIIETVRGRGYMLTAPVQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_002547019.1 two component response regulator CP000647.1.gene1136. Protein 8e-30 42
phoP YP_002547019.1 two component response regulator NC_002516.2.879194.p Protein 4e-32 42
phoP YP_002547019.1 two component response regulator BAC0530 Protein 8e-30 42
phoP YP_002547019.1 two component response regulator BAC0487 Protein 5e-25 41
phoP YP_002547019.1 two component response regulator CP001918.1.gene2526. Protein 1e-29 41
phoP YP_002547019.1 two component response regulator CP001138.1.gene1939. Protein 5e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_002547019.1 two component response regulator VFG0473 Protein 2e-24 41
phoP YP_002547019.1 two component response regulator VFG0475 Protein 5e-30 41