Gene Information

Name : Arad_12100 (Arad_12100)
Accession : YP_002546629.1
Strain :
Genome accession: NC_011987
Putative virulence/resistance : Unknown
Product : transposase number 3 for insertion sequence
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 74553 - 76085 bp
Length : 1533 bp
Strand : -
Note : -

DNA sequence :
ATGACGATAAGGGCGGACGAACTTCCAGATGACCTGAACGCGCTGAAAGCGATGGTGCTTTCGCGCGAGGCAGAGAATGC
CCGCCTACGGCAGATCATCAAGGAATTGCAGCGCCACCGCTTCGGCCGCCGCGCCGAAACGCTTCCCGAGGATCAGCTTC
TCTTGGGCTTGGAAGAGGCCGAACAGGTCGAGGCGCATGGCCTGGAAGCAAAGGAGCAAGCCTCAGCCGATCTGCGCCAG
ACGCGGGTCGCCAAACGGCGAACGAACCGAGGCTCGCTTCCAGCTCACTTGCCAAGGATCGAGATGGTCGTTGATATCGA
TGATCATGCCTGCCCAGGCTGCCATCATGATCTGCATCGGATCGGCGAAGATATCAGCGAGAAGCTGGACATTATTCCGG
CCCAGTTCCGGGTGCTGGTTGTTCGCCGTCCGAAGTACGGGTGCCGGGCTTGCGAGGATGTCGTCGTCCAGGCTCCGGCT
CCCGCCCGGCTGATCGAAGGCGGCATTCCGACCGAAGCAACTGTCGCCCACGTTCTGGTCTCCAAATATGCCGACCATCT
ACCGCTCTATCGTCAAGCGCAAATCTACAAGCGGCAGGGCATAGACCTCGACCGGTCGACGCTTGCCGACTGGGTTGGCC
GTGCCGCTTGGCACCTTCGTCCGGTTCATCAGCGGCTACTCGATGTGTTGAAGTCCTCTTCCAAGCTCTTCGCTGACGAG
ACGACAGCACCCGTGCTTGATCCGGGACGCGGCAAGACCAAGACCGGGCAACTCTGGGCCTATGCTCGCGATGACAGGCC
TTGGCAGGGCAATGATCCACCGGGTGTCGTTTATGTCTATGCACCGGATCGCAAGGCCGAGCGCCCGATGACCCATCTCG
AAGGCTTCGTCGGCATTCTCCAGGTCGACGGTTACAGTGGCTACCGCCCGTTGGCTGCCAAGAACACGGTCTCGCTGGCT
TTCTGCTGGTCGCATGTTCGTCGGCGCTTTTACGAGCTGGCCGCCGCCGGTCCCGCACCCATTGCCACCGAGGCGCTACG
GCGCATTGCCGAACTCTACAAAAACGAAGACGAGATACGCGGCCGGACGCAAGATGATCGTCGTGTCATCAGACAGGAGA
AAAGTCGCCCGATTACCGACAGCCTTGCGCCCTGGCTCACCGAACAGCTCGGCCTCATCAGCCAGAAGACAAAGCTGGCC
GAAGCAATCCGGTACACCTTGTCACGCTGGGATGGGCTGACGAGGTTCATCGGCGACGGTCGCATCGAGATCGACTCCAA
CACAGTCGAGCGATCCATCAGGCCAATTGCTCTAAATCGAAAGAACGCATTGTTTGCAGGCTCTGATGCCGGAGCCGAAC
ACTGGGCGACCATCGCGTCGCTCATCGAGACCGCCAAGCTCAATGATGTCGAACCGCTTGGCTATATCGCTGACGCGCTT
ACCAGGATCGTCAACGGCCACCCGAACAGTCAGATCGACGAGTTATTGCCCTGGTCGTACAGGACCGATAAAATACCCCC
GATGAAAGAATAG

Protein sequence :
MTIRADELPDDLNALKAMVLSREAENARLRQIIKELQRHRFGRRAETLPEDQLLLGLEEAEQVEAHGLEAKEQASADLRQ
TRVAKRRTNRGSLPAHLPRIEMVVDIDDHACPGCHHDLHRIGEDISEKLDIIPAQFRVLVVRRPKYGCRACEDVVVQAPA
PARLIEGGIPTEATVAHVLVSKYADHLPLYRQAQIYKRQGIDLDRSTLADWVGRAAWHLRPVHQRLLDVLKSSSKLFADE
TTAPVLDPGRGKTKTGQLWAYARDDRPWQGNDPPGVVYVYAPDRKAERPMTHLEGFVGILQVDGYSGYRPLAAKNTVSLA
FCWSHVRRRFYELAAAGPAPIATEALRRIAELYKNEDEIRGRTQDDRRVIRQEKSRPITDSLAPWLTEQLGLISQKTKLA
EAIRYTLSRWDGLTRFIGDGRIEIDSNTVERSIRPIALNRKNALFAGSDAGAEHWATIASLIETAKLNDVEPLGYIADAL
TRIVNGHPNSQIDELLPWSYRTDKIPPMKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-73 45
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 7e-81 43
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-91 42
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 4e-68 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_12100 YP_002546629.1 transposase number 3 for insertion sequence VFG1700 Protein 2e-73 45
Arad_12100 YP_002546629.1 transposase number 3 for insertion sequence VFG1513 Protein 3e-68 42