Gene Information

Name : fliQ (Arad_0918)
Accession : YP_002543420.1
Strain :
Genome accession: NC_011985
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 747949 - 748215 bp
Length : 267 bp
Strand : +
Note : FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum

DNA sequence :
ATGAACGAAGCCGATGCATTGGATATCTTCCAGGCAGCTATCTGGACGGTGCTTGTCGCCTCCGGCCCGGCCGTTCTCGC
TGCCATGGTTGTCGGTCTGGTGATCGCCTTGATCCAGGCGCTGACCCAGGTGCAGGAGGCCACGTTGACCTTCGTGCCGA
AGATTGTCGCCGTCATGGTGACGGTCGGGATCAGCGCGCCCTTCGTCGGTTCGCAGATCTCGATCTTCACCAATCTGGTC
TTTTCCCGCATCCAATCGGGATTTTAG

Protein sequence :
MNEADALDIFQAAIWTVLVASGPAVLAAMVVGLVIALIQALTQVQEATLTFVPKIVAVMVTVGISAPFVGSQISIFTNLV
FSRIQSGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 3e-11 43
escS AFO66341.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-08 42
escS AFO66401.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 1e-08 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_002543420.1 flagellar biosynthesis protein FliQ VFG0395 Protein 4e-12 44