Gene Information

Name : avhB8 (Arad_4783)
Accession : YP_002546343.1
Strain :
Genome accession: NC_011985
Putative virulence/resistance : Virulence
Product : type IV secretion protein AvhB8
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3736
EC number : -
Position : 3869000 - 3869671 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence :
ATGGTGACGACGGACAGTCTCAAGGCTTATTTCGACAAGGCCCGGCGGTTCGATCAGGACCGCATGATCCAGATGGAGCG
TTCGGTTCGGATTGCCTGGTTCGTAGCCACCGGGGCCGGTGTTCTTGCGGCGATTTCGACCGTAGCTATCGCAGGCTTGA
CACCGCTGAAGACGGTCGAGCCCTTTGTCGTGAGAGTCGACAATGCCACCGGCATTGTCGATGTCGTTTCGGCACTCACG
TCGACCGCTGGCACCTACGACGAAGCGGTGACCAAATATTTTGCCGCCCGCTATGTTCGTGCCCGCGAGAGTTATGTCTG
GAGCGAGGCGGAGGAGAATTTTCGCACGGTTTCGCTACTCTCAACGGCGCCGGAACAGACCCGCTTTGCCGCGATTTATC
GCGGCGGCAATCCGGATTCCCCGCAAAATATCTACGGCCGCGGTGCCACATCGCGGATCAGCATTGTTTCCATCTCGCTG
ATCAACGCCAAGGTAGTCTCCGTTCGTTATATGCGCACCATTACCCGCGGCGACGAGACCCATACGACCCATTGGGTAGC
AACGCTTACCTTCGCCTATGTGAACGCTCCAATGTCCTCGACCGATCGGCTGGTCAATCCGCTCGGCTTCGTCGTCAGCG
ACTATCGATCCGATCCGGAGGCCATCAATTGA

Protein sequence :
MVTTDSLKAYFDKARRFDQDRMIQMERSVRIAWFVATGAGVLAAISTVAIAGLTPLKTVEPFVVRVDNATGIVDVVSALT
STAGTYDEAVTKYFAARYVRARESYVWSEAEENFRTVSLLSTAPEQTRFAAIYRGGNPDSPQNIYGRGATSRISIVSISL
INAKVVSVRYMRTITRGDETHTTHWVATLTFAYVNAPMSSTDRLVNPLGFVVSDYRSDPEAIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB8 YP_001610004.1 VirB8 protein Virulence Not named Protein 1e-48 52
vblB8 YP_001610348.1 VblB8 protein Virulence Not named Protein 8e-51 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
avhB8 YP_002546343.1 type IV secretion protein AvhB8 VFG2237 Protein 7e-50 52