Gene Information

Name : avhB10 (Arad_4781)
Accession : YP_002546341.1
Strain :
Genome accession: NC_011985
Putative virulence/resistance : Virulence
Product : type IV secretion protein AvhB10
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG2948
EC number : -
Position : 3866957 - 3868126 bp
Length : 1170 bp
Strand : -
Note : -

DNA sequence :
ATGGCGGATGAGACGGAAGACCGTATCCCAGGTGAACGCGCCGAGACGGATGTCAATCCGCGAACCGAGGCCAGTCCATT
CCTGAAGCGTGGCGCCGTGGTTCTGGCGATGGTCGCCTTTGTTGGATTTTCGCTGTGGTCGATGCGTGACGGGCAAAAGG
CCGAGCCAACCCAGCCCGAACATGTCGTCATTCGCCAGACGGCCGACTTCGAGCCGGCGAAGGAAGAGGTAAAGACGGCT
GCACCGCTTCCCGAGGTGGTGCTACCAACGCCTGCGCCAAAGGAGCAGGCCACACCCGCCGAGGACACTTTGCTGGACTC
CGCCCGCCGCGCGCCGGTGATGGCCTATAATGGACAGCAGTCCTCATCGCAGCGCCGTGACACTGCAGCTGCCGTGTCGC
AAGACCCCGGCTCCAATTATCTACCTGTTCCGGGCAGCCTTGGGGGCTCCCAACCTGAAACCGAGGATCAGCGTTTCAAC
AGGATGTTGACGCCGACCCATCTGGAAGGGTCACGCGCCGGCACGCTCGGCAATCGCGACTTCATCGTAGCGATGGGAAC
TTCCATTCCCTGCGTGCTGGAGACGGCGCTCGCCTCCGACCAGCCGGGCTTTGCCAGCTGCGTCATCAACCGCGATGTGC
TTTCCGACAACGGCCGCGTGGTTCTCATGGAGAAAGGAACCCAGATCGTCGGAGAATATCGAGGCGGCTTGAACCGCGGC
CAGAAGCGTCTGTTCGTGCTTTGGAACCGGGCAAAGACGCCAAAAGGTGTGATTATTACACTCGCCTCGCCCGCAACCGA
CGCACTCGGGCGGGCGGGCATGGATGGCTATGTCGACACGCATTGGTTGGAGCGCTTCGGCAACGCCATCCTGCTCTCCA
TCGTCGGCGACGCGTCGACCTATGCCGGCAGCCGGCTGCAGGATAGTGACGTTCAAGCGCAGAATACGACGACGGCTGGC
CAGCAGGCAGCAGCGACCGCCGTCGAACAATCTATCAATATTGTGCCGACATTGACAAAGCATCAGGGCGAACTCGTCTC
GATCTTTGTCGCCCGCGATCTTGATTTTTCCGGCGTCTATAGCCTGCGTGTCACCGAACCCCGCAACAGGATCCTCGATC
GGGCGGTATTGGGGGATTTCAGGCCCCGATCGACGCTTGTCACGAAGTAG

Protein sequence :
MADETEDRIPGERAETDVNPRTEASPFLKRGAVVLAMVAFVGFSLWSMRDGQKAEPTQPEHVVIRQTADFEPAKEEVKTA
APLPEVVLPTPAPKEQATPAEDTLLDSARRAPVMAYNGQQSSSQRRDTAAAVSQDPGSNYLPVPGSLGGSQPETEDQRFN
RMLTPTHLEGSRAGTLGNRDFIVAMGTSIPCVLETALASDQPGFASCVINRDVLSDNGRVVLMEKGTQIVGEYRGGLNRG
QKRLFVLWNRAKTPKGVIITLASPATDALGRAGMDGYVDTHWLERFGNAILLSIVGDASTYAGSRLQDSDVQAQNTTTAG
QQAAATAVEQSINIVPTLTKHQGELVSIFVARDLDFSGVYSLRVTEPRNRILDRAVLGDFRPRSTLVTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB10 YP_001610006.1 VirB10 protein Virulence Not named Protein 1e-81 47
vblB10 YP_001610350.1 VblB10 protein Virulence Not named Protein 8e-68 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
avhB10 YP_002546341.1 type IV secretion protein AvhB10 VFG2239 Protein 8e-83 51