Gene Information

Name : lpsB1 (Arad_4778)
Accession : YP_002546338.1
Strain :
Genome accession: NC_011985
Putative virulence/resistance : Virulence
Product : galactosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 3863624 - 3864199 bp
Length : 576 bp
Strand : +
Note : -

DNA sequence : 
ATGCCCTATACGATCGCCAAGCGCCTTTTCGACTTCCTCGCCGCCTTTGCGGCTGTCGTCGTCTTTTCCATCCCGATCCT
GATCGTCGCGGTCGCCGTGCGGCTGACCTCCCCCGGCCCCATTCTTTACTGGTCGAACCGGGTCGGCCGACGAAACCAGA
TCTTCCACATGCCGAAGTTTCGCAGCATGCGGACCGACACGCCCGCGGTCGCGACGCACCTCCTGAAGGATGCCGACGCC
TATCTGACGCCGATCGGCTCCTTCCTGCGCAAGTCCAGCCTGGACGAGCTGCCGCAGCTGTGGTGCATCCTGAAGGGCGA
AATGAGCATTGTCGGCCCTCGCCCGGCTCTCTTCAACCAGCATGACCTGATTGCTCTACGCACCGAGCGCGGCGTCGACG
CCCTGCTGCCGGGTCTCACCGGCTGGGCGCAGGTCAACGGCCGCGACGAGCTGCCGATCCCGCAAAAAGTGGCGCTGGAC
GAGGACTATCTACAGCGGCGTTCCTTCTTCTTCGACCTCAAGATCATCATCCTAACGGCACTGAAAGTCGTTCGCAGCGA
TGGTGTGACCCATTAA

Protein sequence : 
MPYTIAKRLFDFLAAFAAVVVFSIPILIVAVAVRLTSPGPILYWSNRVGRRNQIFHMPKFRSMRTDTPAVATHLLKDADA
YLTPIGSFLRKSSLDELPQLWCILKGEMSIVGPRPALFNQHDLIALRTERGVDALLPGLTGWAQVNGRDELPIPQKVALD
EDYLQRRSFFFDLKIIILTALKVVRSDGVTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 5e-36 50
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 1e-34 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lpsB1 YP_002546338.1 galactosyltransferase VFG1309 Protein 2e-34 50
lpsB1 YP_002546338.1 galactosyltransferase VFG1369 Protein 7e-31 47