Gene Information

Name : Arad_4385 (Arad_4385)
Accession : YP_002546040.1
Strain :
Genome accession: NC_011985
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3505924 - 3506655 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence :
ATGTATATAGGGCGTCCCGCATTGGCAAAAACCATCATCGAGCTGAAGAAGGCGGATTTGACGCTCGGCAATGCCGCCGC
CTCCGTCCATGTGCTGAAGGGCATCGACCTCACGATCATGGAGGGCGAGGCCGTCGGCATCGTCGGCCCCTCCGGCTCCG
GCAAGTCGACGCTGCTGATGGTGCTGGCCGGCCTGGAAAAGCTGGATAGCGGCGAACTTCTGATCCGCGACACGCCCCTG
CATGCCTTGAGCGAGGATCGCGTCGCTGATTTCCGCGGCAGCAATATCGGCATCGTCTTCCAGTCCTTCCATCTCATCGC
TAACATGACGGCGCTGGAAAATGTCGCCGTGCCGCTGGAACTCGCCAATGTCCGCGACGCCTTCGACATCGCCCGGAAAG
AGCTGGAGGCCGTCGGCCTCGGCGAGCGGCTGAGCCATTATCCCGGCCAGCTTTCAGGCGGCGAACAGCAGCGCGTGGCG
ATCGCCCGCGCGCTCGCCCCCTCGCCGGCCCTTCTGATCGCCGACGAGCCGACCGGCAACCTCGACACCGATACCGGACG
GCAGATCGCCGACCTTTTGTTTGCCCAGCAGGCCGAGCGCGGCACGACGATGCTGCTCGTCACCCACGATCCCTCCCTCG
CCGCCCGCTGCTCCCGCCAGATCCGCGTCCGCTCCGGCGAGATCGAGGGCGACAGCGCCCACGCGCGGACCAGCCAGGCG
GCGATAGCATGA

Protein sequence :
MYIGRPALAKTIIELKKADLTLGNAAASVHVLKGIDLTIMEGEAVGIVGPSGSGKSTLLMVLAGLEKLDSGELLIRDTPL
HALSEDRVADFRGSNIGIVFQSFHLIANMTALENVAVPLELANVRDAFDIARKELEAVGLGERLSHYPGQLSGGEQQRVA
IARALAPSPALLIADEPTGNLDTDTGRQIADLLFAQQAERGTTMLLVTHDPSLAARCSRQIRVRSGEIEGDSAHARTSQA
AIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-29 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Arad_4385 YP_002546040.1 ABC transporter NC_008702.1.4606598. Protein 4e-32 46
Arad_4385 YP_002546040.1 ABC transporter NC_012469.1.7686878. Protein 3e-38 45
Arad_4385 YP_002546040.1 ABC transporter CP001581.1.gene798.p Protein 3e-32 41
Arad_4385 YP_002546040.1 ABC transporter NC_012469.1.7685735. Protein 2e-33 41