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Name : lpsB2 (Arad_0395) Accession : YP_002543023.1 Strain : Genome accession: NC_011985 Putative virulence/resistance : Virulence Product : dTDP-glucose 4,6-dehydratase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 342019 - 344007 bp Length : 1989 bp Strand : + Note : - DNA sequence : ATGGTGCCCGCGGATAAGCTTGTCCTGCCGTTCCTGGCGCTGCCGCGCTCGACCAAGCGCGCGCTGGCGCTGCTTGTCGA TGCCAGCCTGTGCGTGCTGACGGTCTGGTTTGCCTATTGTCTCCGTCTGGATGACTGGGTGATCCTGGAGGGCGTGGAAT GGCTGCCCGCGATCGTTTCCCTGCTCGTCGCCATCCCGATCTTTATCGTCCTTGGCCTCTATCGCGCTATTTTCCGCTAT GCCGGCATGTCAGCCTTCATGACCGTGGTCAAGGCGGTGGCGATCTATGCGCTCGCCTTCATGACCATTTTCACGGCGAT CAGCGTGCCGGGCGTGCCGCGCACTGTCGGCATTCTACAGCCGCTCCTGCTGCTTATCGCCATCGGCCTGTCGCGCATGT GGACGCGATATTGGCTCGGCAATGCCTATCAGCGGCTCTTGAACCGCAATCAGCTGGCCAAGGTGCTGATCTACGGCGCC GGCGCCTCCGGCCGCCAGCTTTCCGGCGCCCTTGCCAACAGTGCCGAGCTGAATGTCGTCGGTTACCTCGATGACGATCG CAACCTGCATGGCAGCATCATGGGTGGCCTGCCGATCTATGATCCGACCGATCTGCCGGCGCTGGTGGTTTCCGGCGATA TCAAGGGCGTGCTACTTGCGCTGCCGAATGCGTCGCGGCAGCGCCGCAACGAAATTCTGGAAAGCATGCGCAAGGCTCGC GTTACCGTGCGTACCATGCCGGACCTGACGGCGCTCGCCCAGGGACGCGTCGCCGTCTCCGATCTCCGCGAACTTGATAT CGAAGACCTGCTTGGCCGTAACGTCATCGCGCCCGATCGTGCCCTGATCGACAAGAATATCCGCGGCAAGGTGGTCATGG TGACCGGCGCGGGCGGTTCGATCGGCAGCGAACTCTGCCGCCAGATCCTGAAGAACGGCCCTTCCTGCCTGTTGCTGGTG GAGCAGAACGAATTTGGGCTTTATGCCATTCATGGTGAGCTGGAAAAAGCGGCGGCGACGTCTGGAAACAGCGAGATCCG CATCATCCCCTTCCTGGCCTCCATTCGCGACGACCGGAGACTGAGGCAGATCATGGAGGCCTGGCGGCCGAAGACCGTGT ATCATGCCGCCGCCTATAAGCATGTGCCGCTCGTCGAATACAATCCCGTCGAGGGCATCCGCAACAATGTACTGGGAACG CTGACCACCGCCGAAGTGGCGCGCGACTGTGGTGTCGAGGACTTCGTGCTGATCAGCACCGACAAGGCCGTGCGCCCGAC CAATATCATGGGCGCCAGCAAGCGGCTGGCGGAGATGGTGCTGCAGGCGATGGATGCGGACCGCAAGCCCGGTGCCGACG GCACCAATTTCGCGATGGTCCGCTTCGGCAACGTGCTCGGTTCCTCCGGCTCCGTCGTGCCGCTCTTCCGCCAGCAGATC CGCGACGGCGGTCCGATCACGCTGACGCATCCCGATATCACCCGCTATTTCATGACCATCCCCGAGGCATCGCAGCTTGT CATCCAGGCAGGCGCCATGTCAGGCGGCGGCGACGTCTTCCTGCTCGACATGGGCGAGCCGGTGCGTATCGCCGATCTCG CGCGCCGCATGGTGGAATTGTCCGGCCTGACGGTCAGGGACGAGGATGAGCCGGACGGCGATATCGAACTGGAGATCACC GGCCTGAGGCCGGGTGAGAAACTCTATGAAGAGCTGCTGATCGGCGACAATCCACAATCGACGAGCCATCCGCGCATCAT GCGGGCCAAGGAAGATTTCCTGCCCTGGCCGGAACTGTCAAAGAAGCTGGCCGCGCTTCAGGCGGCGCTTGATGAAAACG ACGTGCCGCTGGCGAGGGGCTTGCTGCAGAGTTTGGTGTCCGGCTATGCGCCGAGCGGTGACGTGATCGATCTCGTCTTC CGCGAGCGTGAGATGGATCTGCCACTCGACGAGCCGAGTTTCGACAACGTCGTACGGCTCTTGCCTTAG Protein sequence : MVPADKLVLPFLALPRSTKRALALLVDASLCVLTVWFAYCLRLDDWVILEGVEWLPAIVSLLVAIPIFIVLGLYRAIFRY AGMSAFMTVVKAVAIYALAFMTIFTAISVPGVPRTVGILQPLLLLIAIGLSRMWTRYWLGNAYQRLLNRNQLAKVLIYGA GASGRQLSGALANSAELNVVGYLDDDRNLHGSIMGGLPIYDPTDLPALVVSGDIKGVLLALPNASRQRRNEILESMRKAR VTVRTMPDLTALAQGRVAVSDLRELDIEDLLGRNVIAPDRALIDKNIRGKVVMVTGAGGSIGSELCRQILKNGPSCLLLV EQNEFGLYAIHGELEKAAATSGNSEIRIIPFLASIRDDRRLRQIMEAWRPKTVYHAAAYKHVPLVEYNPVEGIRNNVLGT LTTAEVARDCGVEDFVLISTDKAVRPTNIMGASKRLAEMVLQAMDADRKPGADGTNFAMVRFGNVLGSSGSVVPLFRQQI RDGGPITLTHPDITRYFMTIPEASQLVIQAGAMSGGGDVFLLDMGEPVRIADLARRMVELSGLTVRDEDEPDGDIELEIT GLRPGEKLYEELLIGDNPQSTSHPRIMRAKEDFLPWPELSKKLAALQAALDENDVPLARGLLQSLVSGYAPSGDVIDLVF REREMDLPLDEPSFDNVVRLLP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-85 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lpsB2 | YP_002543023.1 | dTDP-glucose 4,6-dehydratase | VFG0029 | Protein | 3e-109 | 47 |
